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Template:STRUCTURE 2ivz

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m (Protected "Template:STRUCTURE 2ivz" [edit=sysop:move=sysop])
Current revision (10:35, 11 March 2013) (edit) (undo)
 
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{{Structure
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 2ivz, resolution 2.00&Aring; (<scene name='initialview01'>initial scene</scene>)
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2ivz]], [[Resolution|resolution]] 2.00&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-
|SITE= <scene name='pdbsite=AC1:Ca+Binding+Site+For+Chain+D'>AC1</scene>
+
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>
-
|ACTIVITY=
+
|RELATEDENTRY=[[1bxi|1bxi]], [[1c5k|1c5k]], [[1crz|1crz]], [[1emv|1emv]], [[1fr2|1fr2]], [[1fsj|1fsj]], [[1v13|1v13]], [[1v14|1v14]], [[1v15|1v15]]
-
|GENE=
+
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ivz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ivz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ivz RCSB], [http://www.ebi.ac.uk/pdbsum/2ivz PDBsum]</span>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam07676 PD40], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK03629 tolB], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam04052 TolB_N]</span>
+
|FUNCTION={{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0003676 | text = nucleic acid binding}}{{GO|id=GO:0016787 | text = hydrolase activity}}{{GO|id=GO:0004519 | text = endonuclease activity}}{{GO|id=GO:0004518 | text = nuclease activity}}{{GO|id=GO:0005102 | text = receptor binding}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0046872 | text = metal ion binding}}
-
|RELATEDENTRY=
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|PROCESS={{GO|id=GO:0017038 | text = protein import}}{{GO|id=GO:0006810 | text = transport}}{{GO|id=GO:0043213 | text = bacteriocin transport}}{{GO|id=GO:0015031 | text = protein transport}}{{GO|id=GO:0009405 | text = pathogenesis}}{{GO|id=GO:0019835 | text = cytolysis}}{{GO|id=GO:0042742 | text = defense response to bacterium}}
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ivz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ivz OCA], [http://www.ebi.ac.uk/pdbsum/2ivz PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ivz RCSB]</span>
+
|COMPONENT={{GO|id=GO:0042597 | text = periplasmic space}}{{GO|id=GO:0005727 | text = extrachromosomal circular DNA}}
 +
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2ivzA01 2Ivza01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2ivzA02 2Ivza02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2ivzB02 2Ivzb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2ivzB01 2Ivzb01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2ivzC01 2Ivzc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2ivzC02 2Ivzc02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2ivzD01 2Ivzd01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2ivzD02 2Ivzd02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011659 Ipr011659], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011042 Ipr011042], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014167 Ipr014167], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR007195 Ipr007195], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011044 Ipr011044], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003058 Ipr003058], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003615 Ipr003615], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002711 Ipr002711]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF07676 PF07676], [http://pfam.sanger.ac.uk/family?acc=PF04052 PF04052]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0A855 P0A855], [http://ca.expasy.org/cgi-bin/niceprot.pl?P09883 P09883]</span>
 +
|uPDB=2IVZ|CONSURF={{!}}-
 +
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
 +
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
 +
{{!}} '''Toggle Conservation Colors:'''
 +
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
 +
Rows = identical sequences:
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>A [x]</text>
 +
<name>jmb_2ivz_A</name>
 +
<title>toggle chain A</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>B [x]</text>
 +
<name>jmb_2ivz_B</name>
 +
<title>toggle chain B</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>C [x]</text>
 +
<name>jmb_2ivz_C</name>
 +
<title>toggle chain C</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>D [x]</text>
 +
<name>jmb_2ivz_D</name>
 +
<title>toggle chain D</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
 
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>E [x]</text>
 +
<name>jmb_2ivz_E</name>
 +
<title>toggle chain E</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>F [x]</text>
 +
<name>jmb_2ivz_F</name>
 +
<title>toggle chain F</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>G [x]</text>
 +
<name>jmb_2ivz_G</name>
 +
<title>toggle chain G</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>H [x]</text>
 +
<name>jmb_2ivz_H</name>
 +
<title>toggle chain H</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
 
}}
}}

Current revision

Drag the structure with the mouse to rotate
2ivz, resolution 2.00Å ()
Ligands:
Related: 1bxi, 1c5k, 1crz, 1emv, 1fr2, 1fsj, 1v13, 1v14, 1v15
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


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