This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Template:STRUCTURE 1b9c

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:35, 11 March 2013) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
{{Structure
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1b9c]], resolution 2.40&Aring; (<scene name='initialview01'>default scene</scene>)}}}
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1b9c]], [[Resolution|resolution]] 2.40&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01353 GFP]</span>
+
|NONSTDRES=<scene name='pdbligand=CRO:{2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4-HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CRO</scene>
-
|NONSTDRES=<scene name='pdbligand=CRO:[2-(1-AMINO-2-HYDROXY-PROPYL)-4-(4-HYDROXY-BENZYLIDINE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETALDEHYDE'>CRO</scene>
+
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1b9c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1b9c OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1b9c RCSB], [http://www.ebi.ac.uk/pdbsum/1b9c PDBsum]</span>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1b9c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1b9c OCA], [http://www.ebi.ac.uk/pdbsum/1b9c PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1b9c RCSB]</span>
+
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/1b9cA00 1B9Ca00], [http://www.cathdb.info/domain/1b9cB00 1B9Cb00], [http://www.cathdb.info/domain/1b9cC00 1B9Cc00], [http://www.cathdb.info/domain/1b9cD00 1B9Cd00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011584 Ipr011584], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000786 Ipr000786], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009017 Ipr009017]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF01353 PF01353]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=38358 d1b9ca_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=38359 d1b9cb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=38360 d1b9cc_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=38361 d1b9cd_]<br>UniProt : [http://www.uniprot.org/uniprot/P42212 P42212]</span>
-
|FUNCTION={{GO|id=GO:0003674 | text = molecular_function}}
+
|uPDB=1B9C|CONSURF={{!}}-
-
|PROCESS={{GO|id=GO:0018298 | text = protein-chromophore linkage}}{{GO|id=GO:0006091 | text = generation of precursor metabolites and energy}}{{GO|id=GO:0008218 | text = bioluminescence}}
+
-
|COMPONENT={{GO|id=GO:0005575 | text = cellular_component}}
+
-
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1b9cA00 1B9Ca00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1b9cB00 1B9Cb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1b9cC00 1B9Cc00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1b9cD00 1B9Cd00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000786 Ipr000786], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009017 Ipr009017], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011584 Ipr011584]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF01353 PF01353]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=38358 d1b9ca_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=38359 d1b9cb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=38360 d1b9cc_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=38361 d1b9cd_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P42212 P42212]</span>
+
-
|CONSURF={{!}}-
+
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"

Current revision

Drag the structure with the mouse to rotate
1b9c, resolution 2.40Å ()
Non-Standard Residues:
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1b9c"
Personal tools