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Template:STRUCTURE 1db1

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1db1, resolution 1.80Å ()

Ligands:

Structural annotation:
Resources:	CATH : 1Db1A00 InterPro : Ipr000324, Ipr001723, Ipr000536, Ipr013088, Ipr001628, Ipr008946 Pfam : PF00104 SCOP : d1db1a_ UniProt : P11473

Functional annotation:
Cellular component:	nucleus
Biological process:	signal transduction intestinal absorption multicellular organismal development organ morphogenesis skeletal development negative regulation of transcription transcription calcium ion transport cellular calcium ion homeostasis regulation of transcription, DNA-dependent
Molecular function:	transcription factor activity receptor activity sequence-specific DNA binding metal ion binding protein binding vitamin D3 receptor activity ligand-dependent nuclear receptor activity transcription regulator activity steroid hormone receptor activity DNA binding zinc ion binding

Evolutionary conservation:

Toggle Conservation Colors:	Rows = identical sequences:
Further Information:	Caveats, Explanation, Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, RCSB, PDBsum

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1db1"

@@ Line 1: / Line 1: @@
 {{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1db1, resolution 1.8&Aring; (<scene name='initialview01'>initial scene</scene>)
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1db1]], [[Resolution|resolution]] 1.80&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-|SITE=
 |LIGAND= <scene name='pdbligand=VDX:5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL'>VDX</scene>
-|ACTIVITY=
+|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1db1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1db1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1db1 RCSB], [http://www.ebi.ac.uk/pdbsum/1db1 PDBsum]</span>
-|GENE=
+|FUNCTION={{GO|id=GO:0003700 | text = transcription factor activity}}{{GO|id=GO:0004872 | text = receptor activity}}{{GO|id=GO:0043565 | text = sequence-specific DNA binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0008434 | text = vitamin D3 receptor activity}}{{GO|id=GO:0004879 | text = ligand-dependent nuclear receptor activity}}{{GO|id=GO:0030528 | text = transcription regulator activity}}{{GO|id=GO:0003707 | text = steroid hormone receptor activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0008270 | text = zinc ion binding}}
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00104 Hormone_recep]</span>
+|PROCESS={{GO|id=GO:0007165 | text = signal transduction}}{{GO|id=GO:0050892 | text = intestinal absorption}}{{GO|id=GO:0007275 | text = multicellular organismal development}}{{GO|id=GO:0009887 | text = organ morphogenesis}}{{GO|id=GO:0001501 | text = skeletal development}}{{GO|id=GO:0016481 | text = negative regulation of transcription}}{{GO|id=GO:0006350 | text = transcription}}{{GO|id=GO:0006816 | text = calcium ion transport}}{{GO|id=GO:0006874 | text = cellular calcium ion homeostasis}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}
-|RELATEDENTRY=
+|COMPONENT={{GO|id=GO:0005634 | text = nucleus}}
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1db1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1db1 OCA], [http://www.ebi.ac.uk/pdbsum/1db1 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1db1 RCSB]</span>
+|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1db1A00 1Db1A00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000324 Ipr000324], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001723 Ipr001723], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000536 Ipr000536], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013088 Ipr013088], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001628 Ipr001628], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008946 Ipr008946]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00104 PF00104]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=19329 d1db1a_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P11473 P11473]</span>
+|uPDB=1DB1|CONSURF={{!}}-
+{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
+{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
+{{!}} '''Toggle Conservation Colors:'''
+{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
+Rows = identical sequences:
+<jmol>
+<jmolButton>
+<script></script>
+<text>A [x]</text>
+<name>jmb_1db1_A</name>
+<title>toggle chain A</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
 }}

Template:STRUCTURE 1db1

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