Taylor sandboxk ricin rRNA modification site

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== Site of ricin modification of rRNA ==
== Site of ricin modification of rRNA ==
<StructureSection load='3u5d' size='400' side='right' caption='ribosomal RNA from Yeast(PDB entry [[3u5d]])' scene=''>
<StructureSection load='3u5d' size='400' side='right' caption='ribosomal RNA from Yeast(PDB entry [[3u5d]])' scene=''>
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Ricin removes an adenine from a specific portion of the 28S rRNA called the <scene name='Taylor_sandboxk_ricin_rRNA_modification_site/Sarcin-ricin_loop/1'>sacrin-ricin loop</scene>, or SRL. This <scene name='Taylor_sandboxk_ricin_rRNA_modification_site/Depurination/1'>depurination</scene> leads to reduced binding of elongation factors to the ribosome and reduced synthesis of proteins. It also triggers apoptosis via activation of the JNK pathway (citation).
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Ricin removes an adenine from a specific portion of the 28S rRNA called the <scene name='Taylor_sandboxk_ricin_rRNA_modification_site/Sarcin-ricin_loop/1'>sacrin-ricin loop</scene>, or SRL. This <scene name='Taylor_sandboxk_ricin_rRNA_modification_site/Depurination/1'>depurination</scene> leads to reduced binding of elongation factors to the ribosome and reduced synthesis of proteins. It also triggers apoptosis via activation of the JNK pathway <ref name="Iordanov">PMID: 9154836</ref>.
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While the structure of an eukaryotic ribosome is known, it is not at the level of detail to be able to precisely map this location. What is known about the location of the depurination is:
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--The depurination occurs in the sacrin-ricin loop of the 28S subunit at a GAGA sequence at A4324 (eukaryotic numbering)
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--L3 and L6 bind to this same loop
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</StructureSection>
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Current revision

Site of ricin modification of rRNA

ribosomal RNA from Yeast(PDB entry 3u5d)

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Ann Taylor

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