This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 1f1j
From Proteopedia
(Difference between revisions)
| (One intermediate revision not shown.) | |||
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1f1j]], [[Resolution|resolution]] 2.35Å (<scene name='initialview01'>default scene</scene>)}}} | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1f1j]], [[Resolution|resolution]] 2.35Å (<scene name='initialview01'>default scene</scene>)}}} | ||
| - | |SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+So4+A+1201'>AC1</scene> and <scene name='pdbsite=AC2:Binding+Site+For+Residue+So4+B+1202'>AC2</scene> | ||
|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> | |LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> | ||
| - | |NONSTDRES=<scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene> | + | |NONSTDRES=<scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=ASJ:(3S)-3-AMINO-4-HYDROXYBUTANOIC+ACID'>ASJ</scene> |
| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1f1j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f1j OCA], [http://www. | + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1f1j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f1j OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1f1j RCSB], [http://www.ebi.ac.uk/pdbsum/1f1j PDBsum]</span> |
| - | + | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/1f1jA00 1F1Ja00], [http://www.cathdb.info/domain/1f1jB00 1F1Jb00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001309 Ipr001309], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011600 Ipr011600], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR016129 Ipr016129], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015917 Ipr015917], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015471 Ipr015471], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002398 Ipr002398], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002138 Ipr002138]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00656 PF00656]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=59596 d1f1ja_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=59597 d1f1jb_]</span> | |
| - | + | ||
| - | + | ||
| - | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/ | + | |
| - | + | ||
|uPDB=1F1J|CONSURF={{!}}- | |uPDB=1F1J|CONSURF={{!}}- | ||
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| - | {{!}} '''Toggle Conservation Colors:''' | ||
| - | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| - | Rows = identical sequences: | ||
| - | <jmol> | ||
| - | <jmolButton> | ||
| - | <script></script> | ||
| - | <text>A [x]</text> | ||
| - | <name>jmb_1f1j_A</name> | ||
| - | <title>toggle chain A</title> | ||
| - | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| - | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| - | </jmolButton> | ||
| - | </jmol> | ||
| - | <jmol> | ||
| - | <jmolButton> | ||
| - | <script></script> | ||
| - | <text>B [x]</text> | ||
| - | <name>jmb_1f1j_B</name> | ||
| - | <title>toggle chain B</title> | ||
| - | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| - | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| - | </jmolButton> | ||
| - | </jmol> | ||
| - | |||
| - | <jmol> | ||
| - | <jmolButton> | ||
| - | <script></script> | ||
| - | <text>C [x]</text> | ||
| - | <name>jmb_1f1j_C</name> | ||
| - | <title>toggle chain C</title> | ||
| - | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| - | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| - | </jmolButton> | ||
| - | </jmol> | ||
| - | <jmol> | ||
| - | <jmolButton> | ||
| - | <script></script> | ||
| - | <text>D [x]</text> | ||
| - | <name>jmb_1f1j_D</name> | ||
| - | <title>toggle chain D</title> | ||
| - | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| - | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| - | </jmolButton> | ||
| - | </jmol> | ||
}} | }} | ||
Current revision
| |||||||
| 1f1j, resolution 2.35Å () | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | |||||||
| Non-Standard Residues: | , | ||||||
| |||||||
| |||||||
| Resources: | FirstGlance, OCA, RCSB, PDBsum | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||

