2isl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2isl" size="350" color="white" frame="true" align="right" spinBox="true" caption="2isl, resolution 2.9&Aring;" /> '''BluB bound to reduced...)
Line 4: Line 4:
==Overview==
==Overview==
-
An insight into a previously unknown step in B(12) biosynthesis was, unexpectedly obtained through our analysis of a mutant of the symbiotic, nitrogen fixing bacterium Sinorhizobium meliloti. This mutant was, identified based on its unusually bright fluorescence on plates containing, the succinoglycan binding dye calcofluor. The mutant contains a Tn5, insertion in a gene that has not been characterized previously in S., meliloti. The closest known homolog is the bluB gene of Rhodobacter, capsulatus, which is implicated in the biosynthesis of B(12) (cobalamin)., The S. meliloti bluB mutant is unable to grow in minimal media and fails, to establish a symbiosis with alfalfa, and these defects can be rescued by, the addition of vitamin B(12) (cyanocobalamin) or the lower ligand of, cobalamin, 5,6-dimethylbenzimidazole (DMB). Biochemical analysis, demonstrated that the bluB mutant does not produce cobalamin unless DMB is, supplied. Sequence comparison suggests that BluB is a member of the, NADH/flavin mononucleotide (FMN)-dependent nitroreductase family, and we, propose that it is involved in the conversion of FMN to DMB.
+
An insight into a previously unknown step in B(12) biosynthesis was unexpectedly obtained through our analysis of a mutant of the symbiotic nitrogen fixing bacterium Sinorhizobium meliloti. This mutant was identified based on its unusually bright fluorescence on plates containing the succinoglycan binding dye calcofluor. The mutant contains a Tn5 insertion in a gene that has not been characterized previously in S. meliloti. The closest known homolog is the bluB gene of Rhodobacter capsulatus, which is implicated in the biosynthesis of B(12) (cobalamin). The S. meliloti bluB mutant is unable to grow in minimal media and fails to establish a symbiosis with alfalfa, and these defects can be rescued by the addition of vitamin B(12) (cyanocobalamin) or the lower ligand of cobalamin, 5,6-dimethylbenzimidazole (DMB). Biochemical analysis demonstrated that the bluB mutant does not produce cobalamin unless DMB is supplied. Sequence comparison suggests that BluB is a member of the NADH/flavin mononucleotide (FMN)-dependent nitroreductase family, and we propose that it is involved in the conversion of FMN to DMB.
==About this Structure==
==About this Structure==
Line 13: Line 13:
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Sinorhizobium meliloti]]
[[Category: Sinorhizobium meliloti]]
-
[[Category: Howard-Jones, A.R.]]
+
[[Category: Howard-Jones, A R.]]
-
[[Category: Larsen, N.A.]]
+
[[Category: Larsen, N A.]]
-
[[Category: Taga, M.E.]]
+
[[Category: Taga, M E.]]
-
[[Category: Walker, G.C.]]
+
[[Category: Walker, G C.]]
-
[[Category: Walsh, C.T.]]
+
[[Category: Walsh, C T.]]
[[Category: FNR]]
[[Category: FNR]]
[[Category: OXY]]
[[Category: OXY]]
Line 26: Line 26:
[[Category: oxidoreductase]]
[[Category: oxidoreductase]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 20:46:00 2008''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:55:28 2008''

Revision as of 15:55, 21 February 2008


2isl, resolution 2.9Å

Drag the structure with the mouse to rotate

BluB bound to reduced flavin (FMNH2) and molecular oxygen. (clear crystal form)

Overview

An insight into a previously unknown step in B(12) biosynthesis was unexpectedly obtained through our analysis of a mutant of the symbiotic nitrogen fixing bacterium Sinorhizobium meliloti. This mutant was identified based on its unusually bright fluorescence on plates containing the succinoglycan binding dye calcofluor. The mutant contains a Tn5 insertion in a gene that has not been characterized previously in S. meliloti. The closest known homolog is the bluB gene of Rhodobacter capsulatus, which is implicated in the biosynthesis of B(12) (cobalamin). The S. meliloti bluB mutant is unable to grow in minimal media and fails to establish a symbiosis with alfalfa, and these defects can be rescued by the addition of vitamin B(12) (cyanocobalamin) or the lower ligand of cobalamin, 5,6-dimethylbenzimidazole (DMB). Biochemical analysis demonstrated that the bluB mutant does not produce cobalamin unless DMB is supplied. Sequence comparison suggests that BluB is a member of the NADH/flavin mononucleotide (FMN)-dependent nitroreductase family, and we propose that it is involved in the conversion of FMN to DMB.

About this Structure

2ISL is a Single protein structure of sequence from Sinorhizobium meliloti with and as ligands. Full crystallographic information is available from OCA.

Reference

Sinorhizobium meliloti bluB is necessary for production of 5,6-dimethylbenzimidazole, the lower ligand of B12., Campbell GR, Taga ME, Mistry K, Lloret J, Anderson PJ, Roth JR, Walker GC, Proc Natl Acad Sci U S A. 2006 Mar 21;103(12):4634-9. Epub 2006 Mar 1. PMID:16537439

Page seeded by OCA on Thu Feb 21 17:55:28 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools