Dioxygenase

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m (Protocatechuate 3,4-dioxygenase moved to Dioxygenase: requested by Editor)
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[[2buu]], [[2buy]], [[2buz]] – AcPCD α,β (mutant) + Fe+3 + catechol derivative<br />
[[2buu]], [[2buy]], [[2buz]] – AcPCD α,β (mutant) + Fe+3 + catechol derivative<br />
[[3lxv]], [[3mi5]], [[3t67]] – PpPCD α,β (mutant) + Fe+3 + catechol derivative<br />
[[3lxv]], [[3mi5]], [[3t67]] – PpPCD α,β (mutant) + Fe+3 + catechol derivative<br />
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'''Catechol 1,2-dioxygenase (CTD''')
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[[1dlm]], [[1dlq]] – AcCTD + Fe+3 <br />
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''CTD complex with aromatic compound''
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[[1dlt]], [[1dmh]] – AcCTD + Fe+3 + catechol derivative<br />
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[[3hgi]] – RoCTD + Fe+3 + benzoic acid – ''Rhodocoddus opacus''<br />
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[[3hhy]], [[3hkp]] – RoCTD + Fe+3 + DHB<br />
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[[3hj8]], [[3hjq]], [[3hjs]], [[3i4v]], [[3i4y]], [[3i51]] – RoCTD + Fe+3 + catechol derivative<br />
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[[3hhx]] – RoCTD + Fe+3 + pyrogallol<br />
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[[2xsu]] – ArCTD + Fe+3 + phosphoinositol derivative – ''Acinetobacter radioresistens''<br />
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[[2xsv]], [[2xsr]] – ArCTD + Fe+3 + phosphoinositol derivative <br />
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'''Chlorocatechol 1,2-dioxygenase (CCTD)'''
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[[3th1]] – PpCCTD + Fe+3 <br />
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[[1s9a]] – RoCCTD + Fe+3 <br />
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[[3o32]], [[3o5u]] – RoCCTD + Fe+3 + dichlorocatechol derivative<br />
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[[3o6j]] – RoCCTD + Fe+3 + hydroxyquinol<br />
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[[3o6r]] – RoCCTD + Fe+3 + pyrogallol<br />
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'''Dioxygenase extradiol family'''
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'''Homoprotocatechuate 2,3-dioxygenase (HPCD)'''
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[[1f1r]], [[1f1u]] – AgHPCD + Mn+2 – ''Arthrobacter globiformis''<br />
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[[1f1x]], [[1q0o]] – BfHPCD + Fe+3 – ''Brevibacterium fuscum''<br />
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[[2ig9]], [[3ojt]] – BfHPCD + Fe+2<br />
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[[3ecj]], [[4ghc]] – BfHPCD (mutant) + Fe+2<br />
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[[3bza]], [[3ojn]] – BfHPCD + Mn+2<br />
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[[3ojj]] – BfHPCD + MCo+2<br />
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''HPCD complex with aromatic compound''
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[[1f1v]] – AgHPCD + Mn+2 + dihydroxyphenyl acetate <br />
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[[1q0c]], [[4ghg]] – BfHPCD + Fe+2 + dihydroxyphenyl acetate <br />
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[[4ghd]] – BfHPCD (mutant) + Fe+2 + dihydroxyphenyl acetate <br />
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[[2iga]] – BfHPCD + Fe+2 + O2 + reaction intermediates<br />
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[[3eck]] – BfHPCD (mutant) + Fe+2 + reaction intermediates<br />
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[[3ojk]] – BfHPCD + Co+2 + catechol derivative<br />
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[[4ghe]], [[4ghf]] – BfHPCD (mutant) + Fe+2 + catechol derivative<br />
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[[4ghh]] – BfHPCD + Fe+2 + catechol derivative<br />
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'''Catechol 2,3-dioxygenase (MPC)'''
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[[1mpy]] – PpMPC + Fe+2 <br />
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[[3hpv]] – PsMPC + Fe+2 - ''Pseudomonas''<br />
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[[3hpy]] – PsMPC + Fe+2 + catechol derivative<br />
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[[3hq0]] – PsMPC + Fe+3 + product<br />
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'''Naphthalene 1,2-dioxygenase (NDO)'''
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[[1ndo]], [[1o7h]], [[1o7w]] – PpNDO + Fe+3 + Fe2S2<br />
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[[2hmj]] – PpNDO (mutant) + Fe+3 + Fe2S2 <br />
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''NDO complex with aromatic compound''
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[[1eg9]] – PpNDO + Fe+3 + Fe2S2 + indole<br />
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[[1o7g]] – PpNDO + Fe+3 + Fe2S2 + naphthalene<br />
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[[1o7m]] – PpNDO + Fe+3 + Fe2S2 + O2<br />
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[[1o7n]] – PpNDO + Fe+3 + Fe2S2 + O2 + indole<br />
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[[1o7p]] – PpNDO + Fe+3 + Fe2S2 + dihydronaphthalene<br />
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[[1uuv]], [[1uuw]] – PpNDO + Fe+3 + Fe2S2 + NO3<br />
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[[2hmk]], [[2hml]] – PpNDO (mutant) + Fe+3 + Fe2S2 + phenanthrene<br />
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[[2hmm]], [[2hmn]] – PpNDO (mutant) + Fe+3 + Fe2S2 + anthracene<br />
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[[2hmo]] – PpNDO + Fe+3 + Fe2S2 + nitrotoluene<br />
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'''Dihydronaphthalene 1,2-dioxygenase (HNDO)'''
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[[2ehz]], [[2ei2]] – PsHNDO + Fe+2 <br />
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[[2ei0]], [[2ei1]], [[2ei3]] – PsHNDO + Fe+2 + dihydroxybephenyl<br />
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'''2,3-dihydroxybiphenyl 1,2-dioxygenase (DHBP)'''
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[[1dhy]], [[1eil]], [[1eiq]], [[1eir]] – PsDHBP + Fe+3 <br />
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[[1kw3]] – PsDHBP + Fe+2 <br />
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[[1kw8]] – PsDHBP + Fe+2 + NO<br />
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[[1kwb]] – PsDHBP (mutant) <br />
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[[1han]], [[1kmy]] – BxDHBP (mutant) + Fe+3 – ''Burkholderia xenovorans''<br />
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''DHBP complex with aromatic compound''
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[[1knd]], [[1knf]] – BxDHBP + Fe+3 + catechol derivative<br />
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[[1lgt]], [[1lkd]] – BxDHBP + Fe+2 + dihydroxybephenyl<br />
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[[1kw6]], [[1kw9]] – PsDHBP + Fe+2 + dihydroxybephenyl<br />
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[[1kwc]] – PsDHBP (mutant) + dihydroxybephenyl<br />
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'''Salicylate 1,2-dioxygenase (SDO)'''
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[[2phd]] – PssSDO + Fe+3 – ''Pseudaminobacter salicylatoxidans''<br />
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[[4fah]], [[4fbf]] – PssSDO (mutant) + Fe+3<br />
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[[3nst]] – PssSDO (mutant) + Fe+2 <br />
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[[3njz]] – PssSDO + Fe+2 +salicylate<br />
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[[3nvc]] – PssSDO (mutant) + Fe+2 +salicylate<br />
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[[3nkt ]] – PssSDO + Fe+2 +naphthoate<br />
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[[3nl1]] – PssSDO + Fe+2 +gentisate<br />
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[[3nw4]], [[4fag]] – PssSDO (mutant) + Fe+2 +gentisate<br />
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'''Biphenyl 1,2-dioxygenase (BDO)'''
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[[3gzy]] – CtBDO + Fe+2 + Fe2S2 – ''Comamonas testosteroni''<br />
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[[2xr8]] – BxBDO + Fe+2 + Fe2S2 <br />
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[[2xso]], [[2yfi]] – BxBDO (mutant) + Fe+2 + Fe2S2 <br />
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''BDO complex with aromatic compound''
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[[3gzx]] – CtBDO + Fe+2 + Fe2S2 + biphenyl <br />
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[[2xrx]] – BxBDO + Fe+2 + Fe2S2 + biphenyl <br />
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[[2xsh]] – BxBDO (mutant) + Fe+2 + Fe2S2 + biphenyl <br />
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[[2yfj]], [[2yfl]] – BxBDO (mutant) + Fe+2 + Fe2S2 + dibenzofuran <br />
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'''Tryptophan 2,3-dioxygenase (TDO)'''
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[[1yw0]] – XcTDO + Mg – ''Xanthomonas campestris''<br />
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[[2nw7]] – XcTDO + heme <br />
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[[4hka]] – TDO + heme – ''Drosophila melanogaster''<br />
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[[3bk9]], [[3e08]] – XcTDO (mutant) + heme + tryptophan <br />
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[[2nw8]], [[2nw9]] – XcTDO + heme + Mn + tryptophan derivative<br />
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[[2nox]] – CmTDO + heme – ''Cupriavidus metallidurans''<br />
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'''4-hydroxyphenylpyruvate dioxygenase (HPPD)'''
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[[1cjx]] – HPPD + Fe+2 – ''Pseudomonas fluorescens''<br />
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[[1t47]] – HPPD + Fe+2 – ''Streptomyces avermitilis''<br />
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[[1sqd]], [[1sp9]] – AtHPPD + Fe+3 – ''Arabidopsis thaliana''<br />
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[[1sqi]] – HPPD + Fe+3 + inhibitor - rat<br />
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[[1tfz]], [[1tg5]] – AtHPPD + Fe+3 + inhibitor <br />
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[[3isq]] – hHPPD + Co+2 - human<br />
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'''Quercetin 2,3-dioxygenase (QDO)'''
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[[1juh]] – AjQDO + Cu+2 – ''Aspergillus japonicus''<br />
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[[2h0v]] – QDO + Fe+3 – ''Bacillus subtilis''<br />
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[[1gqg]], [[1gqh]] – AjQDO + Cu+2 + inhibitor<br />
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[[1h1i]] – AjQDO + Cu+2 + quercetin<br />
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[[1h1m]] – AjQDO + Cu+2 + kaempferol<br />
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'''Taurine/α-ketoglutarate dioxygenase (TauD)'''
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[[1gqw]], [[1gy9]], [[1os7]] – EcTauD + Fe+2 + taurine + oxoglutarate – ''Escherichia coli''<br />
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[[1otj]] – EcTauD + taurine <br />
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[[3pvj]], [[3v15]] – PpTauD <br />
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[[3v17]] – PpTauD + oxoglutarate <br />
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'''3-hydroxyanthranilate 3,4-dioxygenase (HAD)'''
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[[1yfu]] – CmHAD + Fe+3<br />
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[[1yfw]] – CmHAD + Fe+3 + O2 + hydroxyanthranilate<br />
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[[1yfx]] – CmHAD + Fe+3 + NO + hydroxyanthranilate<br />
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[[1yfy]] – CmHAD + Fe+3 + hydroxyanthranilate<br />
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[[1zvf]] – HAD + Ni+2 - yeast<br />
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[[2qnk]] – hHAD + Ni+2 <br />
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[[3fe5]] – HAD + Fe+3 - bovine<br />
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'''Carbazole 1,9a-dioxygenase (CDO)'''
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[[1vck]] – HAD ferredoxin component + Fe+3 + Fe2S2 – ''Pseudomonas resinovorans''<br />
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[[2de5]], [[2de6]] – JaHAD ferredoxin and terminal oxygenase components + Fe+3 + Fe2S2 – ''Janthinobacterium''<br />
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[[2de7]], [[3vmg]] – JaHAD ferredoxin and terminal oxygenase components + Fe+3 + Fe2S2 + carbazole<br />
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[[3vmh]] – JaHAD ferredoxin and terminal oxygenase components + Fe+3 + Fe2S2 + O2<br />
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[[3vmi]] – JaHAD ferredoxin and terminal oxygenase components + Fe+3 + Fe2S2 + carbazole + O2<br />
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'''Homogentisate 1,2-dioxygenase (HGDO)'''
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[[1ey2]] – hHGDO + Fe+2 <br />
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[[1eyb]] – hHGDO <br />
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[[4aq2]] – PpHGDO + Fe+3 <br />
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[[4aq6]] – PpHGDO + Fe+3 + substrate<br />
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[[3zds]] – PpHGDO + Fe+3 + O2<br />

Revision as of 12:15, 4 August 2013

Structure of protocatechuate 3,4-dioxygenase with Fe+3 complex with dihydroxybenzoate (PDB entry 1eob)

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Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman, Jaime Prilusky

Retrieved from "http://52.214.119.220/wiki/index.php/Dioxygenase"
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