Ribosomal protein S19
From Proteopedia
(Difference between revisions)
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[[1qkh]], [[1qkf]] - TtRPS19 - ''Thermus thermophilus'' – NMR | [[1qkh]], [[1qkf]] - TtRPS19 - ''Thermus thermophilus'' – NMR | ||
| - | === S19 in small ribosomal subunit === | ||
| - | [[2zm6]], [[1n36]], [[1j5e]], [[3oge]], [[3ogy]], [[3ohc]], [[3ohd]], [[3ohy]], [[3oi0]], [[3oi2]], [[3oi4]], [[3oto]] - TtRPS19 in 30S ribosomal subunit+THX+16S RRNA - ''Thermus thermophilus''<br /> | ||
| - | [[2vqe]], [[2vqf]], [[2uuc]], [[2e5l]], [[2uu9]], [[2uua]], [[2uub]], [[3pyn]], [[3pyq]], [[3pys]], [[3pyu]] - TtRPS19 in 30S ribosomal subunit+16S RRNA+RNA fragment<br /> | ||
| - | [[3kc4]] – EcRPS19 in 30S ribosomal subunit – ''Escherichia coli''<br /> | ||
| - | [[3i1m]], [[3i1o]], [[3df1]], [[3df3]], [[2vho]], [[2vhp]], [[2avy]], [[2aw7]], [[1pnx]], [[3ofa]], [[3ofb]], [[3ofx]], [[3ofy]], [[3ofo]], [[3ofp]], [[3or9]], [[3ora]], [[3oaq]], [[3oar]] - EcRPS19 in 30S ribosomal subunit+16S RRNA<br /> | ||
| - | [[1i94]], [[1fka]], [[3uxs]], [[3uxt]], [[4dr1]] - TtRPS19 in 30S ribosomal subunit+16S RRNA<br /> | ||
| - | [[4duy]], [[4duz]], [[4dv0]], [[4dv1]], [[4dv2]], [[4dv3]], [[4dv4]], [[4dv5]], [[4dv6]], [[4dv7]] - TtRPS19 in 30S ribosomal subunit+16S RRNA (mutant)<br />[[4dr4]], [[4b3m]], [[4b3r]], [[4b3s]], [[4b3t]] – TtRPS19 in 30S ribosomal subunit+16S RRNA + mRNA<br /> | ||
| - | [[1p87]], [[1p6g]] - EcRPS19 in 30S ribosomal subunit+16S RRNA – Cryo-EM<br /> | ||
| - | [[3bbn]] - RPS19 in 30S ribosomal subunit+16S RRNA – Cryo-EM – spinach<br /> | ||
| - | === S19 in small + large ribosomal subunit === | ||
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| - | [[1ml5]] - EcRPS19 in 30S ribosomal subunit+50S ribosomal subunit+THX+chain release factor 2+P-site tRNA+tRNA Phe+mRNA fragment+23S RRNA+5S RRNA+16S RRNA - EM<br /> | ||
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| - | === S19 in small ribosomal subunit+ chain release factor (RF)=== | ||
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| - | [[3mr8]], [[3ms0]] – TtRPS19 in 30S ribosomal subunit+THX+chain release factor 1+P-site tRNA+mRNA+16S RRNA <br /> | ||
| - | [[3d5a]], [[3d5c]] - TtRPS19 in 30S ribosomal subunit+THX+chain release factor 1+P-site tRNA+E-site tRNA+mRNA +16S RRNA<br /> | ||
| - | [[3zvo]] – TtRPS19 in 30S ribosomal subunit+THX+P-site tRNA Met +mRNA +16S RRNA+chain release factor 3<br /> | ||
| - | [[2b64]] - TtRPS19 in 30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA Phe+mRNA +16S RRNA+chain release factor 1<br /> | ||
| - | [[2b9m]] - TtRPS19 in 30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA Phe+mRNA +16S RRNA+chain release factor 2<br /> | ||
| - | [[2x9r]], [[2x9t]], [[2wh1]], [[2wh3]] - TtRPS19 in 30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+mRNA +16S RRNA<br /> | ||
| - | [[3f1e]], [[3f1g]] - TtRPS19 in 30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+E-site tRNA +16S RRNA<br /> | ||
| - | [[3uoq]] - EcRPS19 + 16S RRNA + mRNA + peptide chain release factor<br /> | ||
| - | [[4kfh]], [[4kfk]] - TtRPS19 in 30S ribosomal subunit+16S RRNA+ RF-2 + mRNA+ P-site tRNA fMet<br /> | ||
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| - | === S19 in small ribosomal subunit+tRNA+mRNA === | ||
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| - | [[2hgi]] - TtRPS19 in 30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA fMet<br /> | ||
| - | [[4l6k]], [[4l6m]] - TtRPS19 in 30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA<br /> | ||
| - | [[2hgp]] - TtRPS19 in 30S ribosomal subunit+16S RRNA+tRNA Phe+mRNA<br /> | ||
| - | [[3t1h]], [[3t1y]] - TtRPS19 in 30S ribosomal subunit+16S RRNA+tRNA Lys +mRNA<br /> | ||
| - | [[3tvf]], [[3tvg]], [[3uyd]], [[3uyf]] - TtRPS19 in 30S ribosomal subunit+16S RRNA+tRNA Leu + tRNA fMet + mRNA<br /> | ||
| - | [[3zn7]], [[3znd]] - TtRPS19 in 30S ribosomal subunit+16S RRNA+A-site tRNA Ile agmatidine + E-site tRNA Ile agmatidine + mRNA<br /> | ||
| - | [[3uz6]], [[3uz7]], [[3uzg]], [[3uzi]] - TtRPS19 in 30S ribosomal subunit+16S RRNA+tRNA Tyr + tRNA fMet + mRNA<br /> | ||
| - | [[2i2p]], [[2i2u]] - EcRPS19 in 30S ribosomal subunit+16S RRNA+tRNA Phe+mRNA<br /> | ||
| - | [[2hgr]], [[3v6u]], [[3v6v]], [[4ej9]], [[4eja]] - TtRPS19 in 30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA fMet+mRNA<br /> | ||
| - | [[1yl4]] – TtRPS19 in 30S ribosomal subunit+ tRNA Phe+16S RRNA+THRS mRNA operator<br /> | ||
| - | [[1pns]] – EcRPS19 in 30S ribosomal subunit+ tRNA Phe+16S RRNA+mRNA <br /> | ||
| - | [[3j0u]], [[3j0v]], [[3j0x]], [[3j0z]], [[3j10]], [[3j20]] – EcRPS19 in 30S ribosomal subunit+ A-site tRNA + P-site tRNA +16S RRNA+mRNA – Cryo-EM<br /> | ||
| - | [[3j13]] – EcRPS19 in 30S ribosomal subunit+ P-site tRNA +16S RRNA+mRNA – Cryo-EM<br /> | ||
| - | [[1xnq]], [[1xnr]] - TtRPS19 in 30S ribosomal subunit+THX+mRNA+tRNA anticodon+16S RRNA<br /> | ||
| - | [[4gkj]], [[4gkk]] - TtRPS19 in 30S ribosomal subunit +16S RRNA +THX + mRNA + tRNA Met<br /> | ||
| - | [[4jv5]], [[4jya]], [[4k0k]], [[4k0l]] - TtRPS19 in 30S ribosomal subunit +16S RRNA +THX + mRNA + ASL-tRNA <br /> | ||
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| - | === S19 in small ribosomal subunit+A-site tRNA === | ||
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| - | [[2uxd]], [[2uxc]] - TtRPS19 in 30S ribosomal subunit+THX+A-site mRNA CGGG+tRNA anticodon+16S RRNA<br /> | ||
| - | [[1n32]], [[1n33]] - TtRPS19 in 30S ribosomal subunit+THX+A-site mRNA fragment+tRNA anticodon+16S RRNA<br /> | ||
| - | [[1n34]] - TtRPS19 in 30S ribosomal subunit+THX+A-site mRNA fragment +16S RRNA<br /> | ||
| - | [[1xmo]], [[1xmq]] - TtRPS19 in 30S ribosomal subunit+THX+A-site mRNA+tRNA anticodon+16S RRNA<br /> | ||
| - | [[2uxb]] - TtRPS19 in 30S ribosomal subunit+THX+A-site mRNA GGGU+tRNA anticodon+16S RRNA<br /> | ||
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| - | === S19 in small ribosomal subunit+P-site tRNA === | ||
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| - | [[3i8g]] - TtRPS19 in 30S ribosomal subunit+P-site tRNA+mRNA +16S RRNA<br /> | ||
| - | [[3i8h]], [[3i9b]], [[3i9d]] - TtRPS19 in 30S ribosomal subunit+THX+P-site tRNA+mRNA +16S RRNA<br /> | ||
| - | [[1ibk]] - TtRPS19 in 30S ribosomal subunit+THX+P-site mRNA fragment +16S RRNA<br /> | ||
| - | [[2wwl]] - EcRPS19 in 30S ribosomal subunit+Poly-Ala chain+P-site tRNA+mRNA +16S RRNA - ''Escherichia coli''<br /> | ||
| - | [[3i1q]] - EcRPS19 in 30S ribosomal subunit+P-site tRNA hairpin+mRNA <br /> | ||
| - | [[3i1s]], [[3i1z]], [[3i21]] - EcRPS17 in 30S ribosomal subunit+P-site tRNA hairpin+mRNA +16S RNA<br /> | ||
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| - | === S19 in small ribosomal subunit+A-site tRNA+P-site tRNA === | ||
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| - | [[1ibl]], [[1ibm]] - TtRPS19 in 30S ribosomal subunit+THX+A-site mRNA fragment+P-site mRNA fragment+tRNA anticodon+16S RRNA<br /> | ||
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| - | === S19 in small ribosomal subunit+P-site tRNA+E-site tRNA === | ||
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| - | [[2ow8]] - TtRPS19 in 30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA+mRNA +16S RRNA<br /> | ||
| - | [[2b9o]] - TtRPS19 in 30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA Phe+mRNA +16S RRNA<br /> | ||
| - | [[2qnh]] - TtRPS19 in 30S ribosomal subunit+THX+P-site tRNA+E-site tRNA+mRNA +16S RRNA<br /> | ||
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| - | === S19 in small ribosomal subunit+A-site tRNA+P-site tRNA+E-site tRNA === | ||
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| - | [[2gy9]], [[2gyb]] - EcRPS19 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA – Cryo-EM<br /> | ||
| - | [[1jgo]], [[1jgp]], [[1jgq]], [[1gix]] - TtRPS19 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+tRNA Phe+mRNA +16S RRNA<br /> | ||
| - | [[4k0p]] - TtRPS19 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA +mRNA +16S RRNA<br /> | ||
| - | [[3e1a]], [[3e1c]] - EcRPS19 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA<br /> | ||
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| - | === S19 in small ribosomal subunit + antibiotics === | ||
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| - | [[1i95]], [[1i97]], [[2hhh]], [[2f4v]], [[4dr2]], [[4dr3]] - TtRPS19 in 30S ribosomal subunit+16S RRNA+antibiotic<br /> | ||
| - | [[1hnx]], [[1hnw]], [[1hnz]], [[1fjg]], [[4aqy]], [[4dr5]], [[4dr6]], [[4dr7]], [[4khp]] – TtRPS19 in 30S ribosomal subunit+16S RRNA+mRNA fragment+antibiotic<br /> | ||
| - | [[2qbb]], [[2qb9]], [[1vs5]], [[1vs7]] , [[2qan]], [[2qal]], [[2qou]], [[2qow]], [[2qoy]], [[2qp0]], [[2z4k]], [[2z4m]] - EcRPS19 in 30S ribosomal subunit+16S RRNA+antibiotic<br /> | ||
| - | [[3sfs]] – EcRPS19 in 30S ribosomal subunit+16S RRNA+ mRNA + RF-3 + antibiotic<br /> | ||
| - | [[4gaq]], [[4gas]] – EcRPS19 in 30S ribosomal subunit+16S RRNA+ mRNA + antibiotic<br /> | ||
| - | [[2j00]], [[2j02]] - TtRPS19 in 30S ribosomal subunit+16S RRNA+paromomycin+P-site tRNA fMet+E-site tRNA Phe+mRNA<br /> | ||
| - | [[2wdg]], [[2wdh]], [[2wdk]], [[2wdm]] - TtRPS19 in 30S ribosomal subunit+THX+P-site tRNA+E-site tRNA+mRNA +16S RRNA+tRNA Phe+paromomycin<br /> | ||
| - | [[3knj]], [[3knh]], [3knl]], [[3knn]] - TtRPS19 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA+ antibiotics<br /> | ||
| - | [[3uz3]], [[3uz4]] - TtRPS19 in 30S ribosomal subunit+16S RRNA+tRNA Leu + tRNA fMet + mRNA + paromomycin<br /> | ||
| - | [[4g5k]], [[4g5m]], [[4g5t]], [[4g5v]] - TtRPS19 in 30S ribosomal subunit+16S RRNA + tRNA fMet + mRNA + antibiotics<br /> | ||
| - | [[3uzl]], [[3uzm]] - TtRPS19 in 30S ribosomal subunit+16S RRNA+tRNA Tyr + tRNA fMet + mRNA + paromomycin | ||
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| - | === S19 in small ribosomal subunit + ribosome recycling factor === | ||
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| - | [[2qbd]], [[2qbf]] – EcRPS19 in 30S ribosomal subunit+16S RRNA+ribosome recycling factor<br /> | ||
| - | [[3r8n]], [[3r8o]], [[4gd1]], [[4gd2]] – EcRPS19 in 30S ribosomal subunit+16S RRNA+ribosome recycling factor + mRNA + tRNA<br /> | ||
| - | [[2qbh]], [[2qbj]] - EcRPS19 in 30S ribosomal subunit+16S RRNA+ribosome recycling factor+gentamicin<br /> | ||
| - | [[2v46]], [[2v48]] - TtRPS19 in 30S ribosomal subunit+16S RRNA+ribosome recycling factor+P-site tRNA Phe+mRNA+tRNA fMet<br /> | ||
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| - | === S19 in small ribosomal subunit + elongation factor (EF)=== | ||
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| - | [[2wri]], [[2wrk]], [[2xsy]], [[2xuy]] - TtRPS19 in 30S ribosomal subunit+THX+P-site tRNA+mRNA +16S RRNA+elongation factor G<br /> | ||
| - | [[2wrn]], [[2wrq]] - TtRPS19 in 30S ribosomal subunit+THX+A-site tRNA+mRNA +16S RRNA+elongation factor TU-4<br /> | ||
| - | [[3fic]] - TtRPS19 in 30S ribosomal subunit+THX+A-site tRNA+P-site tRNA+E-site tRNA+mRNA codon+16S RRNA+elongation factor TU-A<br /> | ||
| - | [[4abr]] – TtRPS19 in 30S ribosomal subunit+THX + E/P-site tRNA fMet +mRNA codon+16S RRNA+elongation factor TU<br /> | ||
| - | [[3izv]] – EcRPS19 in 30S ribosomal subunit+A/T-site tRNA Phe +16S RRNA+elongation factor TU<br /> | ||
| - | [[3j18]] – EcRPS19 in 30S ribosomal subunit+A/T-site tRNA Phe +16S RRNA+ mRNA + SSRA-binding protein + formyl-Met specific initiator tRNA + elongation factor G – Cryo-EM<br /> | ||
| - | [[3izw]] – EcRPS19 in 30S ribosomal subunit+A-site tRNA Phe +mRNA +16S RRNA+elongation factor TU<br /> | ||
| - | [[2y0u]], [[2y0w]], [[2y0y]], [[2y12]], [[2y10]], [[2y18]], [[2y14]], [[2y16]] – TtRPS19 in 30S ribosomal subunit+THX+A-site tRNA+E-site tRNA+mRNA codon+16S RRNA+elongation factor TU<br /> | ||
| - | [[2xqd]] – TtRPS19 in 30S ribosomal subunit+THX+E-site tRNA+mRNA +16S RRNA+elongation factor TU-B<br /> | ||
| - | [[3fih]] - EcRPS19 in 30S ribosomal subunit+A-site tRNA Phe+P-site tRNA+mRNA +16S RRNA+elongation factor TU<br /> | ||
| - | [[3huw]], [[3huy]] - TtRPS19 in 30S ribosomal subunit+THX+tRNA-Met+mRNA +16S RRNA+ EF-P<br /> | ||
| - | [[4b8f]], [[4b8h]] - TtRPS19 in 30S ribosomal subunit+THX+RNA+mRNA +16S RRNA+EF-G<br /> | ||
| - | [[4btc]], [[4kdg]], [[4kdj]] - TtRPS19 in 30S ribosomal subunit+THX+RNA +16S RRNA+EF-G<br /> | ||
| - | [[4juw]] - TtRPS19 in 30S ribosomal subunit+THX+ tRNA Phe +16S RRNA + mRNA +EF-G<br /> | ||
| - | [[4kbt]], [[4kbv]], [[4kcy]], [[4kd0]], [[4kd8]], [[4kda]] - TtRPS19 in 30S ribosomal subunit+THX+ tRNA Met +16S RRNA + mRNA + viomycin + EF-G<br /> | ||
| - | [[4kiy]], [[4kj0]], [[4kj2]], [[4kj4]], [[4kj6]], [[4kj8]], [[4kja]], [[4kjc]] - EcRPS19 in 30S ribosomal subunit +16S RRNA + viomycin + EF-G<br /> | ||
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| - | === S19 in small ribosomal subunit + translation initiation factor === | ||
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| - | [[1i96]] - TtRPS19 in 30S ribosomal subunit+THX+IF3+16S RRNA<br /> | ||
| - | [[1hr0]] - TtRPS19 in 30S ribosomal subunit+THX+IF+16S RRNA<br /> | ||
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| - | === S19 in small ribosomal subunit + various proteins === | ||
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| - | [[3kiq]], [[3kis]], [[3kiu]], [[3kix]] - TtRPS19 in 30S ribosomal subunit+toxin RelE+16S RRNA<br /> | ||
| - | [[4dh9]], [[4dhb]] - TtRPS19 in 30S ribosomal subunit +16S RRNA+mRNA+P-site tRNA fMet +THX + YAEJ<br /> | ||
| - | [[1voq]], [[1vos]], [[1vov]], [[1vox]], [[1voz]] - EcRPS19 in 30S ribosomal subunit+protein Y+16S RRNA<br /> | ||
| - | [[3j36]] - EcRPS19 in 30S ribosomal subunit+ tetracycline resistance protein +16S RRNA + mRNA + P-tRNA – Cryo-EM<br /> | ||
| - | [[2xfz]], [[2xg1]] - TtRPS19 in 30S ribosomal subunit+tRNA Phe+mRNA+colicin E3+16S RRNA<br /> | ||
| - | [[3a1p]] - TtRPS19+ ribosome maturation factor RIMM<br /> | ||
| - | [[3j00]] – EcRPS19 in 30S ribosomal subunit + 16S RRNA + mRNA + FTSQ + apolipoprotein A-I - Cryo EM<br /> | ||
| - | [[2ykr]] – EcRPS19 + 16S RRNA + GMPPNP + GTPase RSGA<br /> | ||
| - | [[4adv]] - EcRPS19 + 16S RRNA + methyltransferase – Cryo EM<br /> | ||
| - | [[3v22]], [[3v24]], [[3v26]], [[3v28]] – TtRPS19 in 30S ribosomal subunit +16S RRNA +THX + modulation factor<br /> | ||
| - | [[3v2c]], [[3v2e]] – TtRPS19 in 30S ribosomal subunit +16S RRNA +THX + ribosome-associated inhibitor<br /> | ||
| - | [[4a2i]] – EcRPS19 + 16S RRNA + GTPase RSGA – Cryo EM | ||
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| - | ===S19 in small 40S ribosomal subunit + various proteins=== | ||
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| - | [[3iz6]] – RPS19 in 40S ribosomal subunit+RACK1 – wheat – Cryo EM<br /> | ||
| - | [[3izb]] - yRPS19 in 40S ribosomal subunit+ RACK1 – yeast - Cryo-EM<br /> | ||
| - | [[3u5c]], [[3u5g]] - yRPS19 in 40S ribosomal subunit+ RACK1 + suppressor protein SMT1<br /> | ||
| - | [[3o2z]], [[3o30]] – yRPS19 in 40S ribosomal subunit+18S RRNA+RACK1<br /> | ||
| - | [[3jyv]] - RPS19 in 40S ribosomal subunit+tRNA Phe+RACK1+18S RRNA – EM – ''Thermomyces lanuginosus''<br /> | ||
| - | [[1s1h]] - yRPS19 in 40S ribosomal subunit+18S RRNA+elongation factor 2 – Cryo-EM <br /> | ||
| - | [[3j3a]] - RPS19 in 40S ribosomal subunit + EF-2 + guanine nucleotide-binding protein – human – Cryo-EM<br /> | ||
| - | [[4kzx]] - rRPS19 in 40S ribosomal subunit+ RACK1 + EIF1 – rabbit – Cryo-EM<br /> | ||
| - | [[4kzy]] - rRPS19 in 40S ribosomal subunit+ RACK1 + EIF1 + EIF1A – Cryo-EM<br /> | ||
| - | [[4kzz]] - rRPS19 in 40S ribosomal subunit+ RACK1 + EIF1A + initiator tRNA – Cryo-EM<br /> | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 09:44, 27 April 2014
Ribosomal protein S19 (RPS19) is one of the 22 proteins which belong to the of the bacterial ribosome. It forms a complex with RPS13 that binds to 16S RRNA. The images at the left and at the right correspond to one representative RPS19, i.e. the crystal structure of Ribosomal protein S19 from Thermus thermophilus (2zm6, chain S).
3D Structures of Ribosomal protein S19
Updated on 27-April-2014
S19
2v7f – RPS19 – Pyroccocus abyssi
1qkh, 1qkf - TtRPS19 - Thermus thermophilus – NMR
