3qw3

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[[Image:3qw3.png|left|200px]]
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==Structure of Leishmania donovani OMP decarboxylase==
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<StructureSection load='3qw3' size='340' side='right' caption='[[3qw3]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3qw3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_infantum Leishmania infantum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QW3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3QW3 FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>
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<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LinJ16.0560 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5671 Leishmania infantum])</td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qw3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3qw3 RCSB], [http://www.ebi.ac.uk/pdbsum/3qw3 PDBsum]</span></td></tr>
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<table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The final two steps of de novo uridine 5'-monophosphate (UMP) biosynthesis are catalyzed by orotate phosphoribosyltransferase (OPRT) and orotidine 5'-monophosphate decarboxylase (OMPDC). In most prokaryotes and simple eukaryotes these two enzymes are encoded by separate genes, whereas in mammals they are expressed as a bifunctional gene product called UMP synthase (UMPS), with OPRT at the N terminus and OMPDC at the C terminus. Leishmania and some closely related organisms also express a bifunctional enzyme for these two steps, but the domain order is reversed relative to mammalian UMPS. In this work we demonstrate that L. donovani UMPS (LdUMPS) is an essential enzyme in promastigotes and that it is sequestered in the parasite glycosome. We also present the crystal structure of the LdUMPS in complex with its product, UMP. This structure reveals an unusual tetramer with two head to head and two tail to tail interactions, resulting in two dimeric OMPDC and two dimeric OPRT functional domains. In addition, we provide structural and biochemical evidence that oligomerization of LdUMPS is controlled by product binding at the OPRT active site. We propose a model for the assembly of the catalytically relevant LdUMPS tetramer and discuss the implications for the structure of mammalian UMPS.
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The Leishmania donovani UMP synthase is essential for promastigote viability and has an unusual tetrameric structure that exhibits substrate-controlled oligomerization.,French JB, Yates PA, Soysa DR, Boitz JM, Carter NS, Chang B, Ullman B, Ealick SE J Biol Chem. 2011 Jun 10;286(23):20930-41. Epub 2011 Apr 19. PMID:21507942<ref>PMID:21507942</ref>
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The line below this paragraph, containing "STRUCTURE_3qw3", creates the "Structure Box" on the page.
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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or leave the SCENE parameter empty for the default display.
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{{STRUCTURE_3qw3| PDB=3qw3 | SCENE= }}
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===Structure of Leishmania donovani OMP decarboxylase===
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
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</div>
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==See Also==
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*[[Phosphoribosyltransferase|Phosphoribosyltransferase]]
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The line below this paragraph, {{ABSTRACT_PUBMED_21507942}}, adds the Publication Abstract to the page
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== References ==
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(as it appears on PubMed at http://www.pubmed.gov), where 21507942 is the PubMed ID number.
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<references/>
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__TOC__
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{{ABSTRACT_PUBMED_21507942}}
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</StructureSection>
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==About this Structure==
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[[3qw3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_infantum Leishmania infantum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QW3 OCA].
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==Reference==
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<ref group="xtra">PMID:021507942</ref><references group="xtra"/>
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[[Category: Leishmania infantum]]
[[Category: Leishmania infantum]]
[[Category: Ealick, S E.]]
[[Category: Ealick, S E.]]

Revision as of 04:42, 5 June 2014

Structure of Leishmania donovani OMP decarboxylase

3qw3, resolution 1.70Å

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