User:Jaime Prilusky/2exp1

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Current revision (12:21, 10 August 2014) (edit) (undo)
 
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==Your Heading Here (maybe something like 'Structure')==<StructureSection load='1stp' size='400' side='right' caption='Structure of HMG-CoA reductase (PDB entry [[1dq8]])' scene=''>Anything in this section will appear adjacent to the 3D structure and will be scrollable.
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<Structure load='' size='280' frame='true' align='left' caption='default platformSpeed, 5 when JSmol' scene='User:Wayne_Decatur/kink-turn_motif/Ktcylinders/5' />
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<scene name='56/561571/Yellow/1'>yellow background</scene>
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<Structure load='' size='280' frame='true' align='right' caption='attribute pspeed=8' scene='User:Wayne_Decatur/kink-turn_motif/Ktcylinders/5' pspeed='8'/>
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<scene name='56/561571/Yellow/2'>space fill</scene> , 50% transparent color
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New attribute <b>pspeed</b> overrides the default value for platformSpeed, set to 5 when using JSmol. On the left hand side applet, cylinders are not drawn while rotating, as specified by the platformSpeed value of 5. On the right applet, the attribute pspeed overrides the default, setting platformSpeed to 8. Toggle spin on the left hand side applet to enable the rendering of cylinders.
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Alice was beginning to get very tired of sitting by her sister on the bank, and of having nothing to do: once or twice she had peeped into the book her sister was reading, but it had no pictures or conversations in it, `and what is the use of a book,' thought Alice `without pictures or conversation?' So she was considering in her own mind (as well as she could, for the hot day made her feel very sleepy and stupid), whether the pleasure of making a daisy-chain would be worth the trouble of getting up and picking the daisies, when suddenly a White Rabbit with pink eyes ran close by her. There was nothing so very remarkable in that; nor did Alice think it so very much out of the way to hear the Rabbit say to itself, `Oh dear! Oh dear! I shall be late!' (when she thought it over afterwards, it occurred to her that she ought to have wondered at this, but at the time it all seemed quite natural); but when the Rabbit actually took a watch out of its waistcoat-pocket, and looked at it, and then hurried on, Alice started to her feet, for it flashed across her mind that she had never before seen a rabbit with either a waistcoat-pocket, or a watch to take out of it, and burning with curiosity, she ran across the field after it, and fortunately was just in time to see it pop down a large rabbit-hole under the hedge.
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Compare when rendering the page adding '''?use=java''' to the URL.
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</StructureSection>
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56/561571/Ktcylinders/1 <scene name='56/561571/Ktcylinders/1'>Cylinders</scene>
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<scene name='56/561571/Yellow/4'>yellow</scene>
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<!--
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<table width=280' align='right' cellpadding='0'><tr><td rowspan='2'>&nbsp;</td><td bgcolor='#eeeeee'><applet load='Image:Kt7.pdb.gz' size='280' frame='true' align='right' scene='User:Wayne_Decatur/kink-turn_motif/Ktcylinders/5' pspeed='8'/></td></tr><tr><td bgcolor='#eeeeee'><center>
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{{Button Toggle NucleicDrumsColorScheme}} {{ColorKey Bases RNA}}
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</center></td></tr></table>
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<ref>doi: 10.1093/nar/gku213</ref>
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<references/>
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-->
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<b>platformSpeed values</b>
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<pre>value >= enables
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8 antialiasDisplay (and thus, all features)
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7 translucency
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6 meshes (contact, draw, isosurface, MO, pmesh, lcaocartoon, CGO)
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5 cartoons, rockets, trace, ribbon
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4 geosurfaces
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3 ellipsoids
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2 wireframe and balls
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1 none of the above (same as "set wireframeRotation off")
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</pre>

Current revision

default platformSpeed, 5 when JSmol

Drag the structure with the mouse to rotate

attribute pspeed=8

Drag the structure with the mouse to rotate

New attribute pspeed overrides the default value for platformSpeed, set to 5 when using JSmol. On the left hand side applet, cylinders are not drawn while rotating, as specified by the platformSpeed value of 5. On the right applet, the attribute pspeed overrides the default, setting platformSpeed to 8. Toggle spin on the left hand side applet to enable the rendering of cylinders.

Compare when rendering the page adding ?use=java to the URL.

56/561571/Ktcylinders/1

platformSpeed values 

value >=  enables
8  antialiasDisplay (and thus, all features)
7  translucency
6  meshes (contact, draw, isosurface, MO, pmesh, lcaocartoon, CGO)
5  cartoons, rockets, trace, ribbon
4  geosurfaces
3  ellipsoids
2  wireframe and balls
1  none of the above (same as "set wireframeRotation off")

Proteopedia Page Contributors and Editors (what is this?)

Jaime Prilusky

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