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1ddp

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[[Image:1ddp.png|left|200px]]
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==Solution structure of a CISPLATIN-INDUCED [CATAGCTATG]2 Interstrand cross-link==
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<StructureSection load='1ddp' size='340' side='right' caption='[[1ddp]], [[NMR_Ensembles_of_Models | 10 NMR models]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1ddp]] is a 2 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DDP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1DDP FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CPT:CISPLATIN'>CPT</scene><br>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ddp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ddp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ddp RCSB], [http://www.ebi.ac.uk/pdbsum/1ddp PDBsum]</span></td></tr>
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<table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The widely used antitumor drug cis-diamminedichloroplatinum(II) (cisplatin or cis-DDP) reacts with DNA, cross-linking two purine residues through the N7 atoms, which reside in the major groove in B-form DNA. The solution structure of the short duplex [d(CAT-AGCTATG)]2 cross-linked at the GC:GC site was determined by nuclear magnetic resonance (NMR). The deoxyguanosine-bridging cis-diammineplatinum(II) lies in the minor groove, and the complementary deoxycytidines are extrahelical. The double helix is locally reversed to a left-handed form, and the helix is unwound and bent toward the minor groove. These findings were independently confirmed by results from a phase-sensitive gel electrophoresis bending assay. The NMR structure differs markedly from previously proposed models but accounts for the chemical reactivity, the unwinding, and the bending of cis-DDP interstrand cross-linked DNA and may be important in the formation and repair of these cross-links in chromatin.
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{{STRUCTURE_1ddp| PDB=1ddp | SCENE= }}
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Solution structure of a cisplatin-induced DNA interstrand cross-link.,Huang H, Zhu L, Reid BR, Drobny GP, Hopkins PB Science. 1995 Dec 15;270(5243):1842-5. PMID:8525382<ref>PMID:8525382</ref>
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===Solution structure of a CISPLATIN-INDUCED [CATAGCTATG]2 Interstrand cross-link===
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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{{ABSTRACT_PUBMED_8525382}}
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== References ==
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<references/>
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==About this Structure==
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__TOC__
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[[1ddp]] is a 2 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DDP OCA].
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</StructureSection>
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==Reference==
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<ref group="xtra">PMID:008525382</ref><references group="xtra"/>
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[[Category: Drobny, G P.]]
[[Category: Drobny, G P.]]
[[Category: Hopkins, P B.]]
[[Category: Hopkins, P B.]]

Revision as of 06:44, 4 September 2014

Solution structure of a CISPLATIN-INDUCED [CATAGCTATG]2 Interstrand cross-link

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