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1wgz
From Proteopedia
(Difference between revisions)
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| - | [[ | + | ==Crystal structure of carboxypeptidase 1 from Thermus thermophilus== |
| + | <StructureSection load='1wgz' size='340' side='right' caption='[[1wgz]], [[Resolution|resolution]] 2.60Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[1wgz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WGZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WGZ FirstGlance]. <br> | ||
| + | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br> | ||
| + | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Choriolysin_L Choriolysin L], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.24.66 3.4.24.66] </span></td></tr> | ||
| + | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wgz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wgz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1wgz RCSB], [http://www.ebi.ac.uk/pdbsum/1wgz PDBsum], [http://www.topsan.org/Proteins/RSGI/1wgz TOPSAN]</span></td></tr> | ||
| + | <table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wg/1wgz_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Carboxypeptidase 1 from the thermophilic eubacterium Thermus thermophilus (TthCP1, 58 kDa), a member of the M32 family of metallocarboxypeptidases, was crystallized by the sitting-drop vapour-diffusion method using PEG 8000 as the precipitant. The crystals diffracted X-rays to beyond 2.6 A resolution using a synchrotron-radiation source. The crystals belonged to the orthorhombic space group C222(1), with unit-cell parameters a = 171.0, b = 231.6, c = 124.9 A. The crystal contains three molecules in an asymmetric unit (VM = 2.11 A3 Da(-1)) and has a solvent content of 61.5%. | ||
| - | + | Crystallization and preliminary X-ray analysis of carboxypeptidase 1 from Thermus thermophilus.,Nagata K, Tsutsui S, Lee WC, Ito K, Kamo M, Inoue Y, Tanokura M Acta Crystallogr D Biol Crystallogr. 2004 Aug;60(Pt 8):1445-6. Epub 2004, Jul 21. PMID:15272172<ref>PMID:15272172</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | + | </div> | |
| - | + | ||
| - | + | ||
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==See Also== | ==See Also== | ||
*[[Carboxypeptidase|Carboxypeptidase]] | *[[Carboxypeptidase|Carboxypeptidase]] | ||
| - | + | == References == | |
| - | == | + | <references/> |
| - | < | + | __TOC__ |
| + | </StructureSection> | ||
[[Category: Choriolysin L]] | [[Category: Choriolysin L]] | ||
[[Category: Thermus thermophilus]] | [[Category: Thermus thermophilus]] | ||
Revision as of 20:17, 28 September 2014
Crystal structure of carboxypeptidase 1 from Thermus thermophilus
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Categories: Choriolysin L | Thermus thermophilus | Inoue, Y. | Ito, K. | Kuramitsu, S. | Lee, W C. | Miyazono, K. | Nagata, K. | RSGI, RIKEN Structural Genomics/Proteomics Initiative. | Tanokura, M. | Tsutsui, S. | Hydrolase | Neurolysin-like carboxypeptidase | Riken structural genomics/proteomics initiative | Rsgi | Structural genomic

