This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1wjj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1wjj" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:1wjj.png|left|200px]]
+
==Solution structure of hypothetical protein F20O9.120 from Arabidopsis thaliana==
-
 
+
<StructureSection load='1wjj' size='340' side='right' caption='[[1wjj]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
-
{{STRUCTURE_1wjj| PDB=1wjj | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1wjj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WJJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WJJ FirstGlance]. <br>
-
===Solution structure of hypothetical protein F20O9.120 from Arabidopsis thaliana===
+
</td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA RAFL07-09-H05 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana])</td></tr>
-
 
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wjj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wjj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1wjj RCSB], [http://www.ebi.ac.uk/pdbsum/1wjj PDBsum], [http://www.topsan.org/Proteins/RSGI/1wjj TOPSAN]</span></td></tr>
-
 
+
<table>
-
==About this Structure==
+
== Evolutionary Conservation ==
-
[[1wjj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WJJ OCA].
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wj/1wjj_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
[[Category: Inoue, M.]]
[[Category: Inoue, M.]]

Revision as of 19:05, 29 September 2014

Solution structure of hypothetical protein F20O9.120 from Arabidopsis thaliana

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Views
Personal tools
Navigation
Toolbox