This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1wys

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1wys" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:1wys.png|left|200px]]
+
==Solution structure of the first zf-AN1 domain of mouse RIKEN cDNA 2310008M20 protein==
-
 
+
<StructureSection load='1wys' size='340' side='right' caption='[[1wys]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
-
{{STRUCTURE_1wys| PDB=1wys | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1wys]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WYS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WYS FirstGlance]. <br>
-
===Solution structure of the first zf-AN1 domain of mouse RIKEN cDNA 2310008M20 protein===
+
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>
-
 
+
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA 5730471C05 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus])</td></tr>
-
 
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wys FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wys OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1wys RCSB], [http://www.ebi.ac.uk/pdbsum/1wys PDBsum], [http://www.topsan.org/Proteins/RSGI/1wys TOPSAN]</span></td></tr>
-
==About this Structure==
+
<table>
-
[[1wys]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WYS OCA].
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wy/1wys_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Mus musculus]]
[[Category: Mus musculus]]
[[Category: Inoue, M.]]
[[Category: Inoue, M.]]

Revision as of 20:10, 29 September 2014

Solution structure of the first zf-AN1 domain of mouse RIKEN cDNA 2310008M20 protein

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Views
Personal tools
Navigation
Toolbox