This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2qsd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2qsd" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:2qsd.png|left|200px]]
+
==Crystal structure of a protein Il1583 from Idiomarina loihiensis==
-
 
+
<StructureSection load='2qsd' size='340' side='right' caption='[[2qsd]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
{{STRUCTURE_2qsd| PDB=2qsd | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2qsd]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Idiomarina_loihiensis Idiomarina loihiensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QSD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2QSD FirstGlance]. <br>
-
===Crystal structure of a protein Il1583 from Idiomarina loihiensis===
+
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene><br>
-
 
+
<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
 
+
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">IL1583 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=135577 Idiomarina loihiensis])</td></tr>
-
==About this Structure==
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qsd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qsd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2qsd RCSB], [http://www.ebi.ac.uk/pdbsum/2qsd PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2qsd TOPSAN]</span></td></tr>
-
[[2qsd]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Idiomarina_loihiensis Idiomarina loihiensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QSD OCA].
+
<table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qs/2qsd_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Idiomarina loihiensis]]
[[Category: Idiomarina loihiensis]]
[[Category: Almo, S C.]]
[[Category: Almo, S C.]]

Revision as of 18:43, 30 September 2014

Crystal structure of a protein Il1583 from Idiomarina loihiensis

2qsd, resolution 2.50Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qsd"
Views
Personal tools
Navigation
Toolbox