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==~~Basic Structural Principles==~~

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{{#tree:id=siteTree|openlevel=1|

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* [[Introduction to protein structure]]

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* [[The Building Blocks]]

** [[Amino Acids]]

** [[Peptide]]

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:: [[Phi and Psi Angles]]

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*** [[User:Stephen Mills/Peptide tutorial 1|Peptide tutorial 1 part 1]]

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:: [[Ramachandran Plots]]

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*** [[User:Stephen Mills/Peptide tutorial 2|Peptide tutorial 1 part 2]]

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** [[Phi and Psi Angles]]

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** [[Ramachandran Plots]]

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: [[Secondary structure]]

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* [[Secondary structure]]

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:: [[~~Sheets~~ in Proteins]]

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** [[Helices in Proteins]]

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:: [[~~Helices~~ in Proteins]]

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*** [[User:Stephen Mills/Secondary Structure: Helices|Secondary Structure tutorial - Helices]]

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** [[Sheets in Proteins]]

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*** [[User:Stephen Mills/Secondary Structure: Sheets|Secondary Structure tutorial - Sheets]]

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: [[Structural_templates]]

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* [[Structural_templates]]

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: [[Globular_Proteins]]

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** [[Globular_Proteins]]

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:: [[Turns in Proteins]]

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*** [[Turns in Proteins]]

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: [[Fibrous Proteins]]

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** [[Fibrous Proteins]]

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:: [[Coiled_coil]]

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*** [[Coiled_coil]]

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:: [[Collagen]] - Illustrates the structure of a collagen segment as well as the structure of a mutated tropocollagen.

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*** [[Collagen]] - Illustrates the structure of a collagen segment as well as the structure of a mutated tropocollagen.

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:: [[Fibroins]]

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*** [[Fibroins]]

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: [[Unusual Motifs in Proteins]]

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:: [[Cation-pi_interactions]]

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:: [[Thermal_motion_of_peptide]]

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: [[~~Intrinsically Disordered Protein~~]]

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* [[Unusual Motifs in Proteins]]

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** [[Cation-pi_interactions]]

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** [[Thermal_motion_of_peptide]]

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: [[~~Calculate structure~~]] ~~- Description of the Jmol command that can be used to highlight helices, sheets and turns of protein structure.~~

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* [[Intrinsically Disordered Protein]]

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}}

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__NOTOC__

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__NOEDITSECTION__

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@@ Line 1: / Line 1: @@
-==Basic Structural Principles==
+{{#tree:id=siteTree|openlevel=1|
+* [[Introduction to protein structure]]
 * [[The Building Blocks]]
 ** [[Amino Acids]]
 ** [[Peptide]]
-:: [[Phi and Psi Angles]]
+*** [[User:Stephen Mills/Peptide tutorial 1|Peptide tutorial 1 part 1]]
-:: [[Ramachandran Plots]]
+*** [[User:Stephen Mills/Peptide tutorial 2|Peptide tutorial 1 part 2]]
+** [[Phi and Psi Angles]]
+** [[Ramachandran Plots]]
-: [[Secondary structure]]
+* [[Secondary structure]]
-:: [[Sheets in Proteins]]
+** [[Helices in Proteins]]
-:: [[Helices in Proteins]]
+*** [[User:Stephen Mills/Secondary Structure: Helices|Secondary Structure tutorial - Helices]]
+** [[Sheets in Proteins]]
+*** [[User:Stephen Mills/Secondary Structure: Sheets|Secondary Structure tutorial - Sheets]]
-: [[Structural_templates]]
+* [[Structural_templates]]
-: [[Globular_Proteins]]
+** [[Globular_Proteins]]
-:: [[Turns in Proteins]]
+*** [[Turns in Proteins]]
-: [[Fibrous Proteins]]
+** [[Fibrous Proteins]]
-:: [[Coiled_coil]]
+*** [[Coiled_coil]]
-:: [[Collagen]] - Illustrates the structure of a collagen segment as well as the structure of a mutated tropocollagen.
+*** [[Collagen]] - Illustrates the structure of a collagen segment as well as the structure of a mutated tropocollagen.
-:: [[Fibroins]]
+*** [[Fibroins]]
-: [[Unusual Motifs in Proteins]]
-:: [[Cation-pi_interactions]]
-:: [[Thermal_motion_of_peptide]]
-: [[Intrinsically Disordered Protein]]
+* [[Unusual Motifs in Proteins]]
+** [[Cation-pi_interactions]]
+** [[Thermal_motion_of_peptide]]
-: [[Calculate structure]] - Description of the Jmol command that can be used to highlight helices, sheets and turns of protein structure.
+* [[Intrinsically Disordered Protein]]
+}}
+__NOTOC__
+__NOEDITSECTION__