This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3cyg
From Proteopedia
m (Protected "3cyg" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==Crystal structure of an uncharacterized protein from Fervidobacterium nodosum Rt17-B1== | |
| - | + | <StructureSection load='3cyg' size='340' side='right' caption='[[3cyg]], [[Resolution|resolution]] 2.61Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3cyg]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Fervidobacterium_nodosum_rt17-b1 Fervidobacterium nodosum rt17-b1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CYG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3CYG FirstGlance]. <br> | |
| - | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Fnod_1146 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=381764 Fervidobacterium nodosum Rt17-B1])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cyg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cyg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3cyg RCSB], [http://www.ebi.ac.uk/pdbsum/3cyg PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3cyg TOPSAN]</span></td></tr> | |
| - | == | + | </table> |
| - | [[3cyg]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Fervidobacterium_nodosum_rt17-b1 Fervidobacterium nodosum rt17-b1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CYG OCA]. | + | == Evolutionary Conservation == |
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cy/3cyg_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Fervidobacterium nodosum rt17-b1]] | [[Category: Fervidobacterium nodosum rt17-b1]] | ||
[[Category: Burley, S K.]] | [[Category: Burley, S K.]] | ||
Revision as of 09:31, 5 November 2014
Crystal structure of an uncharacterized protein from Fervidobacterium nodosum Rt17-B1
| |||||||||||
Categories: Fervidobacterium nodosum rt17-b1 | Burley, S K. | Damodharan, L. | NYSGXRC, New York SGX Research Center for Structural Genomics. | Swaminathan, S. | 10495j | Fervibacterium nodosum | New york sgx research center for structural genomic | Nysgxrc | Protein structure initiative | Psi-ii | Structural genomic | Uncharacterized protein | Unknown function

