This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3do9
From Proteopedia
m (Protected "3do9" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==Crystal structure of protein ba1542 from bacillus anthracis str.ames== | |
| - | + | <StructureSection load='3do9' size='340' side='right' caption='[[3do9]], [[Resolution|resolution]] 2.75Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3do9]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DO9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DO9 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BA_1542, GBAA1542, BAS1430 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1392 Bacillus anthracis])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3do9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3do9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3do9 RCSB], [http://www.ebi.ac.uk/pdbsum/3do9 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3do9 TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | == | + | == Evolutionary Conservation == |
| - | [[3do9]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DO9 OCA]. | + | [[Image:Consurf_key_small.gif|200px|right]] |
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/do/3do9_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Bacillus anthracis]] | [[Category: Bacillus anthracis]] | ||
| - | [[Category: Almo, S C | + | [[Category: Almo, S C]] |
| - | [[Category: Burley, S K | + | [[Category: Burley, S K]] |
| - | [[Category: Freeman, J | + | [[Category: Freeman, J]] |
| - | [[Category: Iizuka, M | + | [[Category: Iizuka, M]] |
| - | [[Category: Maletic, M | + | [[Category: Maletic, M]] |
| - | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics | + | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] |
| - | [[Category: Ozyurt, S | + | [[Category: Ozyurt, S]] |
| - | [[Category: Patskovsky, Y | + | [[Category: Patskovsky, Y]] |
| - | [[Category: Sauder, J M | + | [[Category: Sauder, J M]] |
| - | [[Category: Smith, D | + | [[Category: Smith, D]] |
| - | [[Category: Wasserman, S | + | [[Category: Wasserman, S]] |
| - | + | ||
| - | + | ||
[[Category: New york structural genomix research consortium]] | [[Category: New york structural genomix research consortium]] | ||
[[Category: Protein structure initiative]] | [[Category: Protein structure initiative]] | ||
Revision as of 11:06, 6 November 2014
Crystal structure of protein ba1542 from bacillus anthracis str.ames
| |||||||||||
Categories: Bacillus anthracis | Almo, S C | Burley, S K | Freeman, J | Iizuka, M | Maletic, M | NYSGXRC, New York SGX Research Center for Structural Genomics | Ozyurt, S | Patskovsky, Y | Sauder, J M | Smith, D | Wasserman, S | New york structural genomix research consortium | Protein structure initiative | Psi | Structur genomic | Structural genomic | Uncharacterized protein | Unknown function

