This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3mpo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3mpo" [edit=sysop:move=sysop])
Line 1: Line 1:
-
{{STRUCTURE_3mpo| PDB=3mpo | SCENE= }}
+
==The crystal structure of a hydrolase from Lactobacillus brevis==
-
===The crystal structure of a hydrolase from Lactobacillus brevis===
+
<StructureSection load='3mpo' size='340' side='right' caption='[[3mpo]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[3mpo]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_brevis Lactobacillus brevis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MPO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MPO FirstGlance]. <br>
-
[[3mpo]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_brevis Lactobacillus brevis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MPO OCA].
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HAD, LVIS_0481 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1580 Lactobacillus brevis])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mpo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mpo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3mpo RCSB], [http://www.ebi.ac.uk/pdbsum/3mpo PDBsum]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mp/3mpo_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Lactobacillus brevis]]
[[Category: Lactobacillus brevis]]
-
[[Category: Burley, S K.]]
+
[[Category: Burley, S K]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
[[Category: Structural genomic]]
-
[[Category: Swaminathan, S.]]
+
[[Category: Swaminathan, S]]
-
[[Category: Zhang, Z.]]
+
[[Category: Zhang, Z]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
-
[[Category: New york sgx research center for structural genomic]]
+
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
-
[[Category: Nysgxrc]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
[[Category: Sgx]]
[[Category: Sgx]]
-
[[Category: Structural genomic]]
 

Revision as of 12:59, 6 November 2014

The crystal structure of a hydrolase from Lactobacillus brevis

3mpo, resolution 2.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools