Endonuclease

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{{#tree:id=OrganizedByTopic|openlevels=0|
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===ENN-I===
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*ENN-I
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[[1bix]] - hENN – human<br />
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**[[1bix]] - hENN – human<br />
-
[[1cfr]] – ENN – ''Citrobacter freundii''<br />
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**[[1cfr]] – ENN – ''Citrobacter freundii''<br />
-
[[1af5]] - CrENN – ''Chlamydomonas reinhardtii''<br />
+
**[[1af5]] - CrENN – ''Chlamydomonas reinhardtii''<br />
-
[[1fzr]], [[1m0d]], [[1m0i]], [[3cae]] – T7ENN - Enterobacteria phage T7<br />
+
**[[1fzr]], [[1m0d]], [[1m0i]], [[3cae]] – T7ENN - Enterobacteria phage T7<br />
-
[[2g7e]], [[2g7f]] – VcENN – ''Vibrio cholera''<br />
+
**[[2g7e]], [[2g7f]] – VcENN – ''Vibrio cholera''<br />
-
[[2vnd]] - VcENN (mutant) <br />
+
**[[2vnd]] - VcENN (mutant) <br />
-
[[2pu3]] - VsENN – ''Vibrio salmonicida''
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**[[2pu3]] - VsENN – ''Vibrio salmonicida''
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===ENN-II===
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*ENN-II
-
[[1pvi]], [[1pvu]] - ENN – ''Proteus vulgaris''<br />
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**[[1pvi]], [[1pvu]] - ENN – ''Proteus vulgaris''<br />
-
[[2wsh]] - T4ENN (mutant) - Enterobacteria phage T4<br />
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**[[2wsh]] - T4ENN (mutant) - Enterobacteria phage T4<br />
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[[3w52]] – ENN – ''Arabidopsis thaliana''<br />
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**[[3w52]] – ENN – ''Arabidopsis thaliana''<br />
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===ENN-III===
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*ENN-III
-
[[2abk]], [[1ako]] - EcENN – ''Escherichia coli''<br />
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**[[2abk]], [[1ako]] - EcENN – ''Escherichia coli''<br />
-
[[1orn]], [[1orp]], [[1p59]] - GsENN + DNA – ''Geobacillus stearothermophilus''
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**[[1orn]], [[1orp]], [[1p59]] - GsENN + DNA – ''Geobacillus stearothermophilus''
-
===ENN-IV===
+
*ENN-IV
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[[1qtw]] - EcENN <br />
+
**[[1qtw]] - EcENN <br />
-
[[2nqh]] - EcENN (mutant) <br />
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**[[2nqh]] - EcENN (mutant) <br />
-
[[1qum]] – EcENN + DNA<br />
+
**[[1qum]] – EcENN + DNA<br />
-
[[2nqj]], [[2nq9]], [[4k1g]] - EcENN (mutant) + DNA<br />
+
**[[2nqj]], [[2nq9]], [[4k1g]] - EcENN (mutant) + DNA<br />
-
[[1xp3]] - ENN – ''Bacillus anthracis''<br />
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**[[1xp3]] - ENN – ''Bacillus anthracis''<br />
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[[3aal]] - GkENN – ''Geobacillus kaustophilus''<br />
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**[[3aal]] - GkENN – ''Geobacillus kaustophilus''<br />
-
[[3aam]] - TtENN – ''Thermus thermophilus''
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**[[3aam]] - TtENN – ''Thermus thermophilus''
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===ENN-V===
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*ENN-V
-
[[1eni]], [[1enj]], [[1enk]], [[2end]] - T4ENN <br />
+
**[[1eni]], [[1enj]], [[1enk]], [[2end]] - T4ENN <br />
-
[[1vas]] - T4ENN + DNA<br />
+
**[[1vas]] - T4ENN + DNA<br />
-
[[2w35]], [[2w36]], [[4b20]] - TmENN + DNA – ''Thermotoga maritima''<br />
+
**[[2w35]], [[2w36]], [[4b20]] - TmENN + DNA – ''Thermotoga maritima''<br />
-
[[3hd0]] - TmENN <br />
+
**[[3hd0]] - TmENN <br />
-
[[3ga2]] - BsENN (mutant) – ''Bacillus subtilis''<br />
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**[[3ga2]] - BsENN (mutant) – ''Bacillus subtilis''<br />
-
[[3goc]] - ENN – ''Streptomyces avermitilis''<br />
+
**[[3goc]] - ENN – ''Streptomyces avermitilis''<br />
-
[[2fcc]] – T4ENN + DNA<br />
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**[[2fcc]] – T4ENN + DNA<br />
-
===ENN-VII===
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*ENN-VII
-
[[1en7]], [[1e7d]] - T4ENN <br />
+
**[[1en7]], [[1e7d]] - T4ENN <br />
-
[[1e7l]] - T4ENN (mutant) <br />
+
**[[1e7l]] - T4ENN (mutant) <br />
-
[[2qnc]], [[2qnf]] - T4ENN (mutant) + DNA
+
**[[2qnc]], [[2qnf]] - T4ENN (mutant) + DNA
-
===ENN-VIII===
+
*ENN-VIII
-
[[1q39]], [[1q39]] - EcENN <br />
+
**[[1q39]], [[1q39]] - EcENN <br />
-
[[1q3b]], [[1q3c]] - EcENN (mutant) <br />
+
**[[1q3b]], [[1q3c]] - EcENN (mutant) <br />
-
[[1tdh]] – hENN <br />
+
**[[1tdh]] – hENN <br />
-
[[1bix]] – hENN + DNA<br />
+
**[[1bix]] – hENN + DNA<br />
-
[[1k3x]], [[2ea0]], [[1k3w]], [[1k3x]], [[2ea0]], [[2opf]], [[2oq4]] - EcENN + DNA <br />
+
**[[1k3x]], [[2ea0]], [[1k3w]], [[1k3x]], [[2ea0]], [[2opf]], [[2oq4]] - EcENN + DNA <br />
-
[[2opf]], [[2oq4]] - EcENN (mutant) + DNA
+
**[[2opf]], [[2oq4]] - EcENN (mutant) + DNA
-
===EcoKI ENN===
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*EcoKI ENN
-
[[2ar0]] – EcENN (mutant)<br />
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**[[2ar0]] – EcENN (mutant)<br />
-
===Ecoo109I ENN===
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*Ecoo109I ENN
-
[[1wtd]] - EcENN<br />
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**[[1wtd]] - EcENN<br />
-
[[1wte]] – EcENN + DNA<br />
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**[[1wte]] – EcENN + DNA<br />
-
===EcoRI ENN===
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*EcoRI ENN
-
[[1qc9]] - EcENN<br />
+
**[[1qc9]] - EcENN<br />
-
[[1eri]], [[1ckq]], [[1cl8]], [[1qps]] – EcENN + DNA<br />
+
**[[1eri]], [[1ckq]], [[1cl8]], [[1qps]] – EcENN + DNA<br />
-
[[1qrh]], [[1qri]], [[2oxv]] - EcENN (mutant) + DNA
+
**[[1qrh]], [[1qri]], [[2oxv]] - EcENN (mutant) + DNA
-
===EcoRII ENN===
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*EcoRII ENN
-
[[1na6]] – EcENN<br />
+
**[[1na6]] – EcENN<br />
-
[[3hqf]], [[3hqg]] - EnENN + DNA
+
**[[3hqf]], [[3hqg]] - EnENN + DNA
-
===EcoRV ENN===
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*EcoRV ENN
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[[1rve]], [[1az3]] – EcENN<br />
+
**[[1rve]], [[1az3]] – EcENN<br />
-
[[1az4]] - EcENN (mutant) <br />
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**[[1az4]] - EcENN (mutant) <br />
-
[[2rve]], [[4rve]], [[1rva]], [[1rvb]], [[1rvc]], [[1az0]], [[1bsu]], [[1bua]], [[1bgb]], [[1rv5]], [[1b94]], [[1b95]], [[1eo3]], [[1eo4]], [[1eon]], [[1eoo]], [[1eop]], [[2b0d]], [[2b0e]] - EcENN + DNA<br />
+
**[[2rve]], [[4rve]], [[1rva]], [[1rvb]], [[1rvc]], [[1az0]], [[1bsu]], [[1bua]], [[1bgb]], [[1rv5]], [[1b94]], [[1b95]], [[1eo3]], [[1eo4]], [[1eon]], [[1eoo]], [[1eop]], [[2b0d]], [[2b0e]] - EcENN + DNA<br />
-
[[1bss]], [[1b96]], [[1b97]], [[1stx]], [[1suz]], [[1sx5]], [[1sx8]], [[2ge5]] - EcENN (mutant) + DNA
+
**[[1bss]], [[1b96]], [[1b97]], [[1stx]], [[1suz]], [[1sx5]], [[1sx8]], [[2ge5]] - EcENN (mutant) + DNA
-
===BamHI ENN===
+
*BamHI ENN
-
[[1bam]] – BaENN – ''Bacillus amyloliquefaciens''<br />
+
**[[1bam]] – BaENN – ''Bacillus amyloliquefaciens''<br />
-
[[1bhm]], [[3bam]], [[2bam]], [[1esg]] - BaENN + DNA
+
**[[1bhm]], [[3bam]], [[2bam]], [[1esg]] - BaENN + DNA
-
===FokI ENN===
+
*FokI ENN
-
[[1fok]] – PoENN + DNA – ''Planomicrobium okeanokoites''<br />
+
**[[1fok]] – PoENN + DNA – ''Planomicrobium okeanokoites''<br />
-
[[2fok]] – PoENN
+
**[[2fok]] – PoENN
-
===PvuII ENN===
+
*PvuII ENN
-
[[3pvi]] - PvENN (mutant) + DNA – ''Proteus vulgaris''<br />
+
**[[3pvi]] - PvENN (mutant) + DNA – ''Proteus vulgaris''<br />
-
[[1k0z]], [[1h56]], [[3ksk]] - PvENN<br />
+
**[[1k0z]], [[1h56]], [[3ksk]] - PvENN<br />
-
[[1ni0]] - PvENN (mutant) <br />
+
**[[1ni0]] - PvENN (mutant) <br />
-
[[2pvi]], [[1eyu]], [[1f0o]] - PvENN + DNA
+
**[[2pvi]], [[1eyu]], [[1f0o]] - PvENN + DNA
-
===tRNA-splicing ENN===
+
*tRNA-splicing ENN
-
[[1a79]], [[1a76]], [[1a77]] - MjENN – ''Methanocaldococcus jannaschii''<br />
+
**[[1a79]], [[1a76]], [[1a77]] - MjENN – ''Methanocaldococcus jannaschii''<br />
-
[[2cv8]] - ENN – ''Sulfolobus tokodaii''<br />
+
**[[2cv8]] - ENN – ''Sulfolobus tokodaii''<br />
-
[[2gw6]] – hENN subunit sen15 – NMR<br />
+
**[[2gw6]] – hENN subunit sen15 – NMR<br />
-
[[2gjw]] - AfENN + RNA –'' Archaeoglobus fulgidus''<br />
+
**[[2gjw]] - AfENN + RNA –'' Archaeoglobus fulgidus''<br />
-
[[1r0v]], [[1r11]] – AfENN
+
**[[1r0v]], [[1r11]] – AfENN
-
[[2ohc]], [[2ohe]] - TaENN – ''Thermoplasma acidophilum''<br />
+
**[[2ohc]], [[2ohe]] - TaENN – ''Thermoplasma acidophilum''<br />
-
[[2zyz]] – ENN – ''Pyrobaculum aerophilum''<br />
+
**[[2zyz]] – ENN – ''Pyrobaculum aerophilum''<br />
-
[[3iey]] - ENN + NEQ261 – ''Nanoarchaeum equitans''<br />
+
**[[3iey]] - ENN + NEQ261 – ''Nanoarchaeum equitans''<br />
-
[[3ajv]] - ApENN (mutant) – ''Aeropyrum pernix''<br />
+
**[[3ajv]] - ApENN (mutant) – ''Aeropyrum pernix''<br />
-
[[3p1y]] - ApENN /AfENN<br />
+
**[[3p1y]] - ApENN /AfENN<br />
-
[[3p1z]] - ApENN + protein
+
**[[3p1z]] - ApENN + protein
-
===VSR ENN===
+
*VSR ENN
-
[[1vsr]] – EcENN<br />
+
**[[1vsr]] – EcENN<br />
-
[[1cw0]] - EcENN + DNA
+
**[[1cw0]] - EcENN + DNA
-
===BglI ENN===
+
*BglI ENN
-
[[1dmu]], [[1d2i]] – BsENN + DNA <br />
+
**[[1dmu]], [[1d2i]] – BsENN + DNA <br />
-
[[1dfm]] - BsENN (mutant) + DNA
+
**[[1dfm]] - BsENN (mutant) + DNA
-
===BglII ENN===
+
*BglII ENN
-
[[1es8]] - BsENN
+
**[[1es8]] - BsENN
-
===MunI ENN===
+
*MunI ENN
-
[[1d02]] - ENN (mutant) + DNA - ''Mycoplasma''
+
**[[1d02]] - ENN (mutant) + DNA - ''Mycoplasma''
-
===Sm ENN===
+
*Sm ENN
-
[[1smn]], [[1qae]], [[1ql0]], [[1g8t]] – ENN – ''Serratia marcescens''
+
**[[1smn]], [[1qae]], [[1ql0]], [[1g8t]] – ENN – ''Serratia marcescens''
-
===NaeI ENN===
+
*NaeI ENN
-
[[1ev7]] - LaENN – ''Lechevalieria aerocolonigenes''<br />
+
**[[1ev7]] - LaENN – ''Lechevalieria aerocolonigenes''<br />
-
[[1iaw]] - LaENN + DNA
+
**[[1iaw]] - LaENN + DNA
-
===NgoMIV ENN===
+
*NgoMIV ENN
-
[[1fiu]], [[4abt]] - ENN + DNA – ''Neisseria gonorrheae''
+
**[[1fiu]], [[4abt]] - ENN + DNA – ''Neisseria gonorrheae''
-
===NEI ENN===
+
*NEI ENN
-
[[1tdh]] - hENN
+
**[[1tdh]] - hENN
-
===BsoBI ENN===
+
*BsoBI ENN
-
[[1dc1]] - GsENN + DNA
+
**[[1dc1]] - GsENN + DNA
-
===Bse634I ENN===
+
*Bse634I ENN
-
[[1knv]] – GsENN<br />
+
**[[1knv]] – GsENN<br />
-
[[3v1z]] – GsENN + DNA<br />
+
**[[3v1z]] – GsENN + DNA<br />
-
[[3v20]], [[3v21]] - GsENN (mutant) + DNA
+
**[[3v20]], [[3v21]] - GsENN (mutant) + DNA
-
===HincII ENN===
+
*HincII ENN
-
[[1kc6]], [[1tw8]], [[1xhu]], [[1xhv]], [[1tx3]], [[2gie]] - HiENN + DNA – ''Haemophilus influenza''<br />
+
**[[1kc6]], [[1tw8]], [[1xhu]], [[1xhv]], [[1tx3]], [[2gie]] - HiENN + DNA – ''Haemophilus influenza''<br />
-
[[2gig]], [[2gih]], [[2gii]], [[2gij]], [[3e3y]], [[3e40]], [[3e41]], [[3e42]], [[3e43]], [[3e44]], [[3e45]], [[3ebc]] - HiENN (mutant) + DNA<br />
+
**[[2gig]], [[2gih]], [[2gii]], [[2gij]], [[3e3y]], [[3e40]], [[3e41]], [[3e42]], [[3e43]], [[3e44]], [[3e45]], [[3ebc]] - HiENN (mutant) + DNA<br />
-
[[2aud]] – HiENN
+
**[2aud]] – HiENN
-
===HinDIII ENN===
+
*HinDIII ENN
-
[[2e52]], [[3a4k]] - HiENN + DNA
+
**[[2e52]], [[3a4k]] - HiENN + DNA
-
===HinP1I ENN===
+
*HinP1I ENN
-
[[1ynm]] – HiENN<br />
+
**[[1ynm]] – HiENN<br />
-
[[2fkc]], [[2fkh]], [[2fl3]], [[2flc]] - HiENN + DNA
+
**[[2fkc]], [[2fkh]], [[2fl3]], [[2flc]] - HiENN + DNA
-
===Flap ENN===
+
*Flap ENN
-
[[1mc8]] - ENN (mutant) – ''Pyrococcus horikoshii''<br />
+
**[[1mc8]] - ENN (mutant) – ''Pyrococcus horikoshii''<br />
-
[[3ory]]– ENN – ''Desulfurococcus amylolyticus''<br />
+
**[[3ory]]– ENN – ''Desulfurococcus amylolyticus''<br />
-
[[3q8k]], [[3q8l]], [[3q8m]] - hENN + DNA<br />
+
**[[3q8k]], [[3q8l]], [[3q8m]] - hENN + DNA<br />
-
[[1rxv]], [[1rxw]] - AfENN + DNA<br />
+
**[[1rxv]], [[1rxw]] - AfENN + DNA<br />
-
[[1ul1]] - hENN + PCNA <br />
+
**[[1ul1]] - hENN + PCNA <br />
-
[[2izo]] - SsENN + PCNA – ''Sulfolobus solfataricus''<br />
+
**[[2izo]] - SsENN + PCNA – ''Sulfolobus solfataricus''<br />
-
[[1a76]], [[1a77]] - MjENN <br />
+
**[[1a76]], [[1a77]] - MjENN <br />
-
[[1b43]] – PfENN – ''Pyrococcus furiosus''<br />
+
**[[1b43]] – PfENN – ''Pyrococcus furiosus''<br />
-
[[1rxz]] - AfENN + PCNA <br />
+
**[[1rxz]] - AfENN + PCNA <br />
-
===DNA mismatch ENN===
+
*DNA mismatch ENN
-
[[1odg]] - EcENN + DNA<br />
+
**[[1odg]] - EcENN + DNA<br />
-
[[1h7u]] – hENN<br />
+
**[[1h7u]] – hENN<br />
-
===Vvn ENN===
+
*Vvn ENN
-
[[1ouo]] – VvENN – ''Vibrio vulnificus''<br />
+
**[[1ouo]] – VvENN – ''Vibrio vulnificus''<br />
-
[[1oup]], [[2ivk]] - VvENN + DNA
+
**[[1oup]], [[2ivk]] - VvENN + DNA
-
===BfiI ENN===
+
*BfiI ENN
-
[[2c1l]] – ENN – ''Bacillus firmus''
+
**[[2c1l]] – ENN – ''Bacillus firmus''
-
===SfiI ENN===
+
*SfiI ENN
-
[[2ezv]], [[2f03]] – ENN + DNA – synthetic
+
**[[2ezv]], [[2f03]] – ENN + DNA – synthetic
-
===Ecl18kI ENN===
+
*Ecl18kI ENN
-
[[2fqz]], [[2gb7]] – ENN + DNA – ''Enterobacter cloacae''
+
**[[2fqz]], [[2gb7]] – ENN + DNA – ''Enterobacter cloacae''
-
===SdaI ENN===
+
*SdaI ENN
-
[[2ixs]] – ENN – ''Streptomyces diastaticus''
+
**[[2ixs]] – ENN – ''Streptomyces diastaticus''
-
===PabI ENN===
+
*PabI ENN
-
[[2dvy]] – ENN – ''Pyrococcus abyssi''
+
**[[2dvy]] – ENN – ''Pyrococcus abyssi''
-
===PspGI ENN===
+
*PspGI ENN
-
[[3bm3]] – ENN – ''Pyrococcus''
+
**[[3bm3]] – ENN – ''Pyrococcus''
-
===NHN ENN===
+
*NHN ENN
-
[[2qgp]] – ENN – ''Geobacter metallireducens''
+
**[[2qgp]] – ENN – ''Geobacter metallireducens''
-
===UV damage ENN===
+
*UV damage ENN
-
[[2j6v]], [[3bzg]], [[3c0s]] – TtENN <br />
+
**[[2j6v]], [[3bzg]], [[3c0s]] – TtENN <br />
-
[[3bzj]], [[3c0l]], [[3c0q]] - TtENN (mutant)<br />
+
**[[3bzj]], [[3c0l]], [[3c0q]] - TtENN (mutant)<br />
-
[[4gle]] - SaENN + DNA<br />
+
**[[4gle]] - SaENN + DNA<br />
-
===NotI ENN===
+
*NotI ENN
-
[[3bvq]] - NoENN – ''Nocardia otitidiscaviarum''<br />
+
**[[3bvq]] - NoENN – ''Nocardia otitidiscaviarum''<br />
-
[[3c25]] - NoENN + DNA
+
**[[3c25]] - NoENN + DNA
-
===BpujI ENN===
+
*BpujI ENN
-
[[2vla]], [[3s1s]] – ENN – ''Bacillus pumilus''
+
**[[2vla]], [[3s1s]] – ENN – ''Bacillus pumilus''
-
===Sau3AI ENN===
+
*Sau3AI ENN
-
[[2reu]] – ENN C terminal – ''Staphylococcus aureus''
+
**[[2reu]] – ENN C terminal – ''Staphylococcus aureus''
-
===HpyI ENN===
+
*HpyI ENN
-
[[3fc3]], [[3gox – HpENN99 + DNA – ''Helicobacter pylori''<br />
+
**[[3fc3]], [[3gox – HpENN99 + DNA – ''Helicobacter pylori''<br />
-
[[3or3]] – HpENN88 + DNA
+
**[[3or3]] – HpENN88 + DNA
-
===PacI ENN===
+
*PacI ENN
-
[[3ldy]], [[3m7k]] - PaENN + DNA – ''Psdeudomonas alcaligenes''
+
**[[3ldy]], [[3m7k]] - PaENN + DNA – ''Psdeudomonas alcaligenes''
-
===Crossover junction ENN===
+
*Crossover junction ENN
-
[[2kpf]] - ENN – mouse
+
**[[2kpf]] - ENN – mouse
-
===OkrAI ENN===
+
*OkrAI ENN
-
[[3odh]] - ENN + DNA – ''Oceanobacter kriegii''
+
**[[3odh]] - ENN + DNA – ''Oceanobacter kriegii''
-
===BspD6I ENN===
+
*BspD6I ENN
-
[[2ewf]] - ENN – ''Bacillus''
+
**[[2ewf]] - ENN – ''Bacillus''
-
===ThaI ENN===
+
*ThaI ENN
-
[[3ndh]] - TaENN + DNA
+
**[[3ndh]] - TaENN + DNA
-
===Xpf ENN===
+
*Xpf ENN
-
[[1z00]], [[2a1j]] - hENN C terminal + DNA excision repair protein<br />
+
**[[1z00]], [[2a1j]] - hENN C terminal + DNA excision repair protein<br />
-
[[2bgw]] - ApENN + DNA <br />
+
**[[2bgw]] - ApENN + DNA <br />
-
[[2bhn]] - ApENN <br />
+
**[[2bhn]] - ApENN <br />
-
==Intron-encoded endonuclease==
+
*'''Intron-encoded endonuclease'''
-
===I-PpoI ENN===
+
*I-PpoI ENN
-
[[1a74]], [[1ipp]], [[1a73]], [[1cz0]] - PpENN + DNA – ''Physarum polycephalum''<br />
+
**[[1a74]], [[1ipp]], [[1a73]], [[1cz0]] - PpENN + DNA – ''Physarum polycephalum''<br />
-
[[1cyq]], [[1evw]], [[2o6m]] - PpENN (mutant) + DNA<br />
+
**[[1cyq]], [[1evw]], [[2o6m]] - PpENN (mutant) + DNA<br />
-
[[1evx]] - PpENN
+
**[[1evx]] - PpENN
-
===I-CreI ENN===
+
*I-CreI ENN
-
[[1bp7]], [[1g9y]], [[1g9z]], [[1n3e]], [[1n3f]], [[2vbj]], [[2vbl]], [[2vbn]], [[2vbo]], [[4aqu]], [[4aqx]] - CrENN + DNA <br />
+
**[[1bp7]], [[1g9y]], [[1g9z]], [[1n3e]], [[1n3f]], [[2vbj]], [[2vbl]], [[2vbn]], [[2vbo]], [[4aqu]], [[4aqx]] - CrENN + DNA <br />
-
[[1u0c]], [[1u0d]], [[1t9i]], [[1t9j]], [[2i3p]], [[2i3q]], [[4aab]], [[4aad]], [[4aae]], [[4aaf]], [[4aag]] - CrENN (mutant) + DNA<br />
+
**[[1u0c]], [[1u0d]], [[1t9i]], [[1t9j]], [[2i3p]], [[2i3q]], [[4aab]], [[4aad]], [[4aae]], [[4aaf]], [[4aag]] - CrENN (mutant) + DNA<br />
-
[[2o7m]] - CrENN
+
**[[2o7m]] - CrENN
-
===I-CeuI ENN===
+
*I-CeuI ENN
-
[[2ex5]] - ENN (mutant) + DNA – ''Chlamydomonas eugametos''
+
**[[2ex5]] - ENN (mutant) + DNA – ''Chlamydomonas eugametos''
-
===I-DmoI ENN===
+
*I-DmoI ENN
-
[[1b24]], [[2vs7]], [[2vs8]] - DmENN + DNA – ''Desulfurococcus mobilis''<br />
+
**[[1b24]], [[2vs7]], [[2vs8]] - DmENN + DNA – ''Desulfurococcus mobilis''<br />
-
[[1mow]] – DmENN/CrENN + DNA
+
**[[1mow]] – DmENN/CrENN + DNA
-
===I-AniI ENN===
+
*I-AniI ENN
-
[[1p8k]], [[2qoj]], [[3uvf]] - EnENN + DNA – ''Emericella nidulans''<br />
+
**[[1p8k]], [[2qoj]], [[3uvf]] - EnENN + DNA – ''Emericella nidulans''<br />
-
[[3eh8]] - EnENN (mutant) + DNA
+
**[[3eh8]] - EnENN (mutant) + DNA
-
===I-HmuI ENN===
+
*I-HmuI ENN
-
[[1u3e]] - ENN + DNA – Bacillus phage spo1
+
**[[1u3e]] - ENN + DNA – Bacillus phage spo1
-
===I-TevI ENN===
+
*I-TevI ENN
-
[[1i3j]], [[1t2t]] - T4ENN + DNA<br />
+
**[[1i3j]], [[1t2t]] - T4ENN + DNA<br />
-
[[1ln0]], [[1mk0]] – T4ENN (mutant)
+
**[[1ln0]], [[1mk0]] – T4ENN (mutant)
-
===I-SceI ENN===
+
*I-SceI ENN
-
[[1dfa]], [[1ef0]] – yENN – yeast<br />
+
**[[1dfa]], [[1ef0]] – yENN – yeast<br />
-
[[1gpp]] – yENN (mutant) <br />
+
**[[1gpp]] – yENN (mutant) <br />
-
[[1lws]], [[1lwt]], [[1r7m]], [[3c0w]], [[3c0x]], [[3ool]] - yENN + DNA<br />
+
**[[1lws]], [[1lwt]], [[1r7m]], [[3c0w]], [[3c0x]], [[3ool]] - yENN + DNA<br />
-
[[3oor]] - yENN (mutant) + DNA
+
**[[3oor]] - yENN (mutant) + DNA
-
===I-PkoII ENN===
+
*I-PkoII ENN
-
[[2cw7]], [[2cw8]] – ENN – ''Thermococcus kodakarensis''
+
**[[2cw7]], [[2cw8]] – ENN – ''Thermococcus kodakarensis''
-
===I-MspI ENN===
+
*I-MspI ENN
-
[[1sa3]], [[1yfi]], [[2fld]] – ENN + DNA – ''Moraxella''
+
**[[1sa3]], [[1yfi]], [[2fld]] – ENN + DNA – ''Moraxella''
-
===I-PfuI ENN===
+
*I-PfuI ENN
-
[[1dq3]] – PfENN
+
**[[1dq3]] – PfENN
-
===I-Tsp061I ENN===
+
*I-Tsp061I ENN
-
[[2dch]] – ENN – ''Thermoproteus''
+
**[[2dch]] – ENN – ''Thermoproteus''
-
===I-Vdi141I ENN===
+
*I-Vdi141I ENN
-
[[3e54]] – ENN – ''Vulcanisaeta distribute''
+
**[[3e54]] – ENN – ''Vulcanisaeta distribute''
-
===I-MtuI ENN===
+
*I-MtuI ENN
-
[[3ifj]], [[3igd]] - MtENN (mutant) – ''Mycobacterium tuberculosis''<br />
+
**[[3ifj]], [[3igd]] - MtENN (mutant) – ''Mycobacterium tuberculosis''<br />
-
[[2l8l]] - MtENN
+
**[[2l8l]] - MtENN
-
===I-MsoI ENN===
+
*I-MsoI ENN
-
[[1m5x]], [[3fd2]] – MoENN + DNA – ''Monomastix''<br />
+
**[[1m5x]], [[3fd2]] – MoENN + DNA – ''Monomastix''<br />
-
[[3ko2]] – MoENN (mutant) + DNA
+
**[[3ko2]] – MoENN (mutant) + DNA
-
===I-GzeMII ENN===
+
*I-GzeMII ENN
-
[[4efj]] – ENN + DNA – ''Gibberella zeae''
+
**[[4efj]] – ENN + DNA – ''Gibberella zeae''
-
===I-tRNA ENN===
+
*I-tRNA ENN
-
 
+
-
[[4fz2]] – MoENN – ''Candidatus micrarchaeum''<br />
+
 +
**[[4fz2]] – MoENN – ''Candidatus micrarchaeum''<br />
 +
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 10:45, 24 November 2014

Template:STRUCTURE 1rva Endonuclease (ENN) cleaves phosphodiester bond within polynucleotide chain. ENN cleaves DNA at a restriction site which is usually a 6-nucleotide palindrome. ENN is restriction site–specific. Various types of ENN differ by their mechanism of action. ENN is used in genetic engineering to make recombinant DNA. ENN requires a restriction site and a cleavage pattern. ENN-I operates on DNA with separate restriction site and cleavage pattern, while ENN-II operates on overlapping restriction site and cleavage pattern. Some ENNs are encoded within introns thus facilitating their mobility. These ENNs or inteins are designated I-ENN. See also

3D structures of endonuclease

Updated on 24-November-2014 {{#tree:id=OrganizedByTopic|openlevels=0|

  • ENN-I
    • 1bix - hENN – human
    • 1cfr – ENN – Citrobacter freundii
    • 1af5 - CrENN – Chlamydomonas reinhardtii
    • 1fzr, 1m0d, 1m0i, 3cae – T7ENN - Enterobacteria phage T7
    • 2g7e, 2g7f – VcENN – Vibrio cholera
    • 2vnd - VcENN (mutant)
    • 2pu3 - VsENN – Vibrio salmonicida
  • ENN-II
    • 1pvi, 1pvu - ENN – Proteus vulgaris
    • 2wsh - T4ENN (mutant) - Enterobacteria phage T4
    • 3w52 – ENN – Arabidopsis thaliana
  • ENN-III
    • 2abk, 1ako - EcENN – Escherichia coli
    • 1orn, 1orp, 1p59 - GsENN + DNA – Geobacillus stearothermophilus
  • ENN-IV
    • 1qtw - EcENN
    • 2nqh - EcENN (mutant)
    • 1qum – EcENN + DNA
    • 2nqj, 2nq9, 4k1g - EcENN (mutant) + DNA
    • 1xp3 - ENN – Bacillus anthracis
    • 3aal - GkENN – Geobacillus kaustophilus
    • 3aam - TtENN – Thermus thermophilus
  • ENN-V
  • ENN-VII
  • ENN-VIII
  • EcoKI ENN
    • 2ar0 – EcENN (mutant)
  • Ecoo109I ENN
  • EcoRI ENN
  • EcoRII ENN
  • EcoRV ENN
  • BamHI ENN
  • FokI ENN
    • 1fok – PoENN + DNA – Planomicrobium okeanokoites
    • 2fok – PoENN
  • PvuII ENN
  • tRNA-splicing ENN
    • 1a79, 1a76, 1a77 - MjENN – Methanocaldococcus jannaschii
    • 2cv8 - ENN – Sulfolobus tokodaii
    • 2gw6 – hENN subunit sen15 – NMR
    • 2gjw - AfENN + RNA – Archaeoglobus fulgidus
    • 1r0v, 1r11 – AfENN
    • 2ohc, 2ohe - TaENN – Thermoplasma acidophilum
    • 2zyz – ENN – Pyrobaculum aerophilum
    • 3iey - ENN + NEQ261 – Nanoarchaeum equitans
    • 3ajv - ApENN (mutant) – Aeropyrum pernix
    • 3p1y - ApENN /AfENN
    • 3p1z - ApENN + protein
  • VSR ENN
  • BglI ENN
  • BglII ENN
  • MunI ENN
    • 1d02 - ENN (mutant) + DNA - Mycoplasma
  • Sm ENN
  • NaeI ENN
    • 1ev7 - LaENN – Lechevalieria aerocolonigenes
    • 1iaw - LaENN + DNA
  • NgoMIV ENN
    • 1fiu, 4abt - ENN + DNA – Neisseria gonorrheae
  • NEI ENN
  • BsoBI ENN
  • Bse634I ENN
  • HincII ENN
  • HinDIII ENN
  • HinP1I ENN
  • Flap ENN
    • 1mc8 - ENN (mutant) – Pyrococcus horikoshii
    • 3ory– ENN – Desulfurococcus amylolyticus
    • 3q8k, 3q8l, 3q8m - hENN + DNA
    • 1rxv, 1rxw - AfENN + DNA
    • 1ul1 - hENN + PCNA
    • 2izo - SsENN + PCNA – Sulfolobus solfataricus
    • 1a76, 1a77 - MjENN
    • 1b43 – PfENN – Pyrococcus furiosus
    • 1rxz - AfENN + PCNA
  • DNA mismatch ENN
  • Vvn ENN
    • 1ouo – VvENN – Vibrio vulnificus
    • 1oup, 2ivk - VvENN + DNA
  • BfiI ENN
    • 2c1l – ENN – Bacillus firmus
  • SfiI ENN
  • Ecl18kI ENN
    • 2fqz, 2gb7 – ENN + DNA – Enterobacter cloacae
  • SdaI ENN
    • 2ixs – ENN – Streptomyces diastaticus
  • PabI ENN
    • 2dvy – ENN – Pyrococcus abyssi
  • PspGI ENN
    • 3bm3 – ENN – Pyrococcus
  • NHN ENN
    • 2qgp – ENN – Geobacter metallireducens
  • UV damage ENN
  • NotI ENN
    • 3bvq - NoENN – Nocardia otitidiscaviarum
    • 3c25 - NoENN + DNA
  • BpujI ENN
    • 2vla, 3s1s – ENN – Bacillus pumilus
  • Sau3AI ENN
    • 2reu – ENN C terminal – Staphylococcus aureus
  • HpyI ENN
    • 3fc3, [[3gox – HpENN99 + DNA – Helicobacter pylori
    • 3or3 – HpENN88 + DNA
  • PacI ENN
    • 3ldy, 3m7k - PaENN + DNA – Psdeudomonas alcaligenes
  • Crossover junction ENN
    • 2kpf - ENN – mouse
  • OkrAI ENN
    • 3odh - ENN + DNA – Oceanobacter kriegii
  • BspD6I ENN
    • 2ewf - ENN – Bacillus
  • ThaI ENN
  • Xpf ENN
    • 1z00, 2a1j - hENN C terminal + DNA excision repair protein
    • 2bgw - ApENN + DNA
    • 2bhn - ApENN
  • Intron-encoded endonuclease
  • I-PpoI ENN
  • I-CreI ENN
  • I-CeuI ENN
    • 2ex5 - ENN (mutant) + DNA – Chlamydomonas eugametos
  • I-DmoI ENN
    • 1b24, 2vs7, 2vs8 - DmENN + DNA – Desulfurococcus mobilis
    • 1mow – DmENN/CrENN + DNA
  • I-AniI ENN
    • 1p8k, 2qoj, 3uvf - EnENN + DNA – Emericella nidulans
    • 3eh8 - EnENN (mutant) + DNA
  • I-HmuI ENN
    • 1u3e - ENN + DNA – Bacillus phage spo1
  • I-TevI ENN
  • I-SceI ENN
  • I-PkoII ENN
    • 2cw7, 2cw8 – ENN – Thermococcus kodakarensis
  • I-MspI ENN
  • I-PfuI ENN
  • I-Tsp061I ENN
    • 2dch – ENN – Thermoproteus
  • I-Vdi141I ENN
    • 3e54 – ENN – Vulcanisaeta distribute
  • I-MtuI ENN
    • 3ifj, 3igd - MtENN (mutant) – Mycobacterium tuberculosis
    • 2l8l - MtENN
  • I-MsoI ENN
    • 1m5x, 3fd2 – MoENN + DNA – Monomastix
    • 3ko2 – MoENN (mutant) + DNA
  • I-GzeMII ENN
    • 4efj – ENN + DNA – Gibberella zeae
  • I-tRNA ENN
    • 4fz2 – MoENN – Candidatus micrarchaeum

}}

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

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