Pre-mRNA-splicing factor

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{{#tree:id=OrganizedByTopic|openlevels=0|
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===Pre-mRNA-splicing factor 2===
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*Pre-mRNA-splicing factor 2
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[[3beg]] – hPrp residues 105-219 + Ser/Thr-protein kinase – human<BR />
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**[[3beg]] – hPrp residues 105-219 + Ser/Thr-protein kinase – human<BR />
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[[2o3d]] – hPrp P33 subunit
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**[[2o3d]] – hPrp P33 subunit
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===Pre-mRNA-splicing factor 3===
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*Pre-mRNA-splicing factor 3
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[[1x4q]] – hPrp PWI domain - NMR<BR />
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**[[1x4q]] – hPrp PWI domain - NMR<BR />
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===Pre-mRNA-splicing factor 3B===
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*Pre-mRNA-splicing factor 3B
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[[3lqv]], [[2f9d]], [[2f9j]] – hPrp residues 377-415 + pre-mRNA branch site protein 14<BR />
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**[[3lqv]], [[2f9d]], [[2f9j]] – hPrp residues 377-415 + pre-mRNA branch site protein 14<BR />
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[[2fho]] - hPrp residues 379-424 + spliceosomal protein P14 - NMR<BR />
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**[[2fho]] - hPrp residues 379-424 + spliceosomal protein P14 - NMR<BR />
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[[2do5]] – hPrp subunit 2 – NMR<BR />
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**[[2do5]] – hPrp subunit 2 – NMR<BR />
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[[1x5t]] - hPrp subunit 4 – NMR<BR />
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**[[1x5t]] - hPrp subunit 4 – NMR<BR />
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[[1x5u]] - hPrp subunit 4 RNA-binding domain – NMR<BR />
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**[[1x5u]] - hPrp subunit 4 RNA-binding domain – NMR<BR />
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===Pre-mRNA-splicing factor 8===
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*Pre-mRNA-splicing factor 8
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[[3sbt]], [[4ilh]] – yPrp RNAseH like domain + A1 cistron-splicing factor AAR2 – yeast<BR />
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**[[3sbt]], [[4ilh]] – yPrp RNAseH like domain + A1 cistron-splicing factor AAR2 – yeast<BR />
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[[4jk7]], [[4jk9]] - yPrp RNAseH like domain <br />
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**[[4jk7]], [[4jk9]] - yPrp RNAseH like domain <br />
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[[4ilj]], [[4jk8]], [[4jka]], [[4jkb]], [[4jkc]], [[4jkd]], [[4jke]], [[4jkf]], [[4jkg]], [[4jkh]] - yPrp RNAseH like domain (mutant)<br />
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**[[4ilj]], [[4jk8]], [[4jka]], [[4jkb]], [[4jkc]], [[4jkd]], [[4jke]], [[4jkf]], [[4jkg]], [[4jkh]] - yPrp RNAseH like domain (mutant)<br />
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[[3e66]] – yPrp β-finger domain<BR />
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**[[3e66]] – yPrp β-finger domain<BR />
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[[3e9o]], [[3e9p]] - yPrp RNA-binding domain<BR />
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**[[3e9o]], [[3e9p]] - yPrp RNA-binding domain<BR />
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[[2p87]], [[2og4]], [[3sbg]] - yPrp C terminal<BR />
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**[[2p87]], [[2og4]], [[3sbg]] - yPrp C terminal<BR />
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[[3zef]], [[4i43]] – yPrp + A1 cistron-splicing factor AAR2<br />
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**[[3zef]], [[4i43]] – yPrp + A1 cistron-splicing factor AAR2<br />
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[[4bgd]] – yPrp JAB1/MPN domain + pre-mRNA-splicing helicase BRR2<br />
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**[[4bgd]] – yPrp JAB1/MPN domain + pre-mRNA-splicing helicase BRR2<br />
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[[4kit]] – yPrp JAB1/MPN domain + U5 small nuclear ribonucleoprotein helicase <br />
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**[[4kit]] – yPrp JAB1/MPN domain + U5 small nuclear ribonucleoprotein helicase <br />
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[[4ilg]] – yPrp JAB1/MPN+RNAseH domains + A1 cistron-splicing factor AAR2 <br />
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**[[4ilg]] – yPrp JAB1/MPN+RNAseH domains + A1 cistron-splicing factor AAR2 <br />
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[[4bgd]] – yPrp JAB1/MPN+RNAseH domains + A1 cistron-splicing factor AAR2 + pre-mRNA-splicing helicase BRR2<br />
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**[[4bgd]] – yPrp JAB1/MPN+RNAseH domains + A1 cistron-splicing factor AAR2 + pre-mRNA-splicing helicase BRR2<br />
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[[3lru]] – hPrp residues 1831-1990<BR />
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**[[3lru]] – hPrp residues 1831-1990<BR />
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[[3e9l]] – hPrp endonuclease domain<BR />
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**[[3e9l]] – hPrp endonuclease domain<BR />
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[[3enb]] - hPrp core domain IV<BR />
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**[[3enb]] - hPrp core domain IV<BR />
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[[2p8r]] – Prp C terminal (mutant) – ''Caenorhabditis elegans''
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**[[2p8r]] – Prp C terminal (mutant) – ''Caenorhabditis elegans''
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===Pre-mRNA-splicing factor 9===
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*Pre-mRNA-splicing factor 9
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[[4dgw]] – yPrp + Prp 21 + Prp 11
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**[[4dgw]] – yPrp + Prp 21 + Prp 11
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===Pre-mRNA-splicing factor 11===
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*Pre-mRNA-splicing factor 11
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[[4dgw]] – yPrp + Prp 21 + Prp 9
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**[[4dgw]] – yPrp + Prp 21 + Prp 9
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===Pre-mRNA-splicing factor 18===
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*Pre-mRNA-splicing factor 18
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[[2dk4]] – hPrp splicing factor motif domain - NMR<BR />
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**[[2dk4]] – hPrp splicing factor motif domain - NMR<BR />
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===Pre-mRNA-splicing factor 19===
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*Pre-mRNA-splicing factor 19
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[[3lrv]] – yPrp WD40 domain<BR />
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**[[3lrv]] – yPrp WD40 domain<BR />
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[[2bay]] – yPrp U-box<BR />
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**[[2bay]] – yPrp U-box<BR />
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[[1n87]] - yPrp U-box - NMR<BR />
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**[[1n87]] - yPrp U-box - NMR<BR />
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===Pre-mRNA-splicing factor 20===
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*Pre-mRNA-splicing factor 20
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[[2i2y]] – Prp RNA-binding domain + RNA – ''Streptococcus'' – NMR<BR />
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**[[2i2y]] – Prp RNA-binding domain + RNA – ''Streptococcus'' – NMR<BR />
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[[2i38]] - hPrp RNA-binding domain (mutant) – NMR<BR />
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**[[2i38]] - hPrp RNA-binding domain (mutant) – NMR<BR />
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===Pre-mRNA-splicing factor 21===
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*Pre-mRNA-splicing factor 21
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[[4dgw]] – yPrp + Prp 9 + Prp 11
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**[[4dgw]] – yPrp + Prp 9 + Prp 11
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===snRNA-associated-splicing factor 24===
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*snRNA-associated-splicing factor 24
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[[2l9w]] – yPrp C terminal – NMR<BR />
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**[[2l9w]] – yPrp C terminal – NMR<BR />
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[[2kh9]] – yPrp residues 115-197 + RNA – NMR<BR />
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**[[2kh9]] – yPrp residues 115-197 + RNA – NMR<BR />
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[[2go9]] – yPrp RNA-binding domains – NMR<BR />
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**[[2go9]] – yPrp RNA-binding domains – NMR<BR />
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[[2ghp]] - yPrp RNA-binding domains
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**[[2ghp]] - yPrp RNA-binding domains
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===Pre-mRNA-splicing factor 31===
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*Pre-mRNA-splicing factor 31
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[[2ozb]] – hPrp + RNA + tri-snRNP <br />
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**[[2ozb]] – hPrp + RNA + tri-snRNP <br />
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[[3siu]], [[3siv]] – hPrp + NHP2-like protein + snRNP <br />
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**[[3siu]], [[3siv]] – hPrp + NHP2-like protein + snRNP <br />
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===Pre-mRNA-splicing factor 40===
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*Pre-mRNA-splicing factor 40
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[[1o6w]] – yPrp WW domain – yeast - NMR<br />
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**[[1o6w]] – yPrp WW domain – yeast - NMR<br />
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[[2b7e]] – yPrp FF1 domain - NMR<br />
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**[[2b7e]] – yPrp FF1 domain - NMR<br />
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[[2kfd]] – yPrp FF4 domain - NMR<br />
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**[[2kfd]] – yPrp FF4 domain - NMR<br />
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===Pre-mRNA-splicing factor 43P===
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*Pre-mRNA-splicing factor 43P
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[[2xau]], [[3kx2]] – yPrp + ADP
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**[[2xau]], [[3kx2]] – yPrp + ADP
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===Pre-mRNA-splicing factor cwc2===
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*Pre-mRNA-splicing factor cwc2
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[[3tp2]], [[3u1l]], [[3u1m]] – yPrp <br />
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**[[3tp2]], [[3u1l]], [[3u1m]] – yPrp <br />
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===Pre-mRNA-splicing factor RBM22===
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*Pre-mRNA-splicing factor RBM22
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[[2ytc]] – yPrp RNA-binding domain - NMR<BR />
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**[[2ytc]] – yPrp RNA-binding domain - NMR<BR />
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*Pre-mRNA-splicing factor RDS3
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===Pre-mRNA-splicing factor RDS3===
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**[[2k0a]] – yPrp - NMR<BR />
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[[2k0a]] – yPrp - NMR<BR />
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*Pre-mRNA-splicing factor URN1
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===Pre-mRNA-splicing factor URN1===
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[[2juc]] – yPrp FF domain - NMR<BR />
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**[[2juc]] – yPrp FF domain - NMR<BR />
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}}

Revision as of 10:17, 4 December 2014

Template:STRUCTURE 3e9l

Pre-mRNA-splicing factors (Prp) are the proteins which associate with mRNA at its various splicing sites to produce alternative splicing. For details on pre-mRNA-splicing factors see

3D Structures of pre-mRNA splicing factors

Updated on 04-December-2014

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

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