3rix

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:3rix.png|left|200px]]
+
==1.7A resolution structure of a firefly luciferase-Aspulvinone J inhibitor complex==
 +
<StructureSection load='3rix' size='340' side='right' caption='[[3rix]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3rix]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Photinus_pyralis Photinus pyralis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RIX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3RIX FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=923:(5Z)-4-HYDROXY-3-[(2R)-2-(2-HYDROXYPROPAN-2-YL)-2,3-DIHYDRO-1-BENZOFURAN-5-YL]-5-{[(2R)-2-(2-HYDROXYPROPAN-2-YL)-2,3-DIHYDRO-1-BENZOFURAN-5-YL]METHYLIDENE}FURAN-2(5H)-ONE'>923</scene></td></tr>
 +
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Photinus-luciferin_4-monooxygenase_(ATP-hydrolyzing) Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.12.7 1.13.12.7] </span></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3rix FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rix OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3rix RCSB], [http://www.ebi.ac.uk/pdbsum/3rix PDBsum]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The chemical diversity of nature has tremendous potential for the discovery of molecular probes and medicinal agents. However, sensitivity of HTS assays to interfering components of crude extracts derived from plants, and macro- and microorganisms has curtailed their use in lead discovery. Here, we describe a process for leveraging the concentration-response curves obtained from quantitative HTS to improve the initial selection of "actives" from a library of partially fractionated natural product extracts derived from marine actinomycetes and fungi. By using pharmacological activity, the first-pass CRC paradigm improves the probability that labor-intensive subsequent steps of reculturing, extraction, and bioassay-guided isolation of active component(s) target the most promising strains and growth conditions. We illustrate how this process identified a family of fungal metabolites as potent inhibitors of firefly luciferase, subsequently resolved in molecular detail by X-ray crystallography.
-
{{STRUCTURE_3rix| PDB=3rix | SCENE= }}
+
Titration-based screening for evaluation of natural product extracts: identification of an aspulvinone family of luciferase inhibitors.,Cruz PG, Auld DS, Schultz PJ, Lovell S, Battaile KP, MacArthur R, Shen M, Tamayo-Castillo G, Inglese J, Sherman DH Chem Biol. 2011 Nov 23;18(11):1442-52. PMID:22118678<ref>PMID:22118678</ref>
-
===1.7A resolution structure of a firefly luciferase-Aspulvinone J inhibitor complex===
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
-
{{ABSTRACT_PUBMED_22118678}}
+
==See Also==
-
 
+
*[[Luciferase|Luciferase]]
-
==About this Structure==
+
== References ==
-
[[3rix]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Photinus_pyralis Photinus pyralis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RIX OCA].
+
<references/>
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:022118678</ref><references group="xtra"/>
+
[[Category: Photinus pyralis]]
[[Category: Photinus pyralis]]
-
[[Category: Auld, D S.]]
+
[[Category: Auld, D S]]
-
[[Category: Battaile, K P.]]
+
[[Category: Battaile, K P]]
-
[[Category: Inglese, J.]]
+
[[Category: Inglese, J]]
-
[[Category: Lopez, P C.]]
+
[[Category: Lopez, P C]]
-
[[Category: Lovell, S.]]
+
[[Category: Lovell, S]]
-
[[Category: MacArthur, R.]]
+
[[Category: MacArthur, R]]
-
[[Category: Schultz, P J.]]
+
[[Category: Schultz, P J]]
-
[[Category: Shen, M.]]
+
[[Category: Shen, M]]
-
[[Category: Sherman, D H.]]
+
[[Category: Sherman, D H]]
-
[[Category: Tamayo, G.]]
+
[[Category: Tamayo, G]]
[[Category: Aspulvinone]]
[[Category: Aspulvinone]]
[[Category: Luminescence]]
[[Category: Luminescence]]

Revision as of 12:23, 9 December 2014

1.7A resolution structure of a firefly luciferase-Aspulvinone J inhibitor complex

3rix, resolution 1.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools