This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3m6e
From Proteopedia
(Difference between revisions)
m (Protected "3m6e" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==F80A mutant of the Urea Transporter from Desulfovibrio Vulgaris== | |
| - | + | <StructureSection load='3m6e' size='340' side='right' caption='[[3m6e]], [[Resolution|resolution]] 2.65Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[3m6e]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M6E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3M6E FirstGlance]. <br> |
| - | [[3m6e]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M6E OCA]. | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AU:GOLD+ION'>AU</scene></td></tr> |
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DVU_1160 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=881 Desulfovibrio vulgaris])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3m6e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m6e OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3m6e RCSB], [http://www.ebi.ac.uk/pdbsum/3m6e PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m6/3m6e_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Urea transporter|Urea transporter]] | *[[Urea transporter|Urea transporter]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Desulfovibrio vulgaris]] | [[Category: Desulfovibrio vulgaris]] | ||
| - | [[Category: Levin, E J | + | [[Category: Levin, E J]] |
| - | [[Category: NYCOMPS, New York Consortium on Membrane Protein Structure | + | [[Category: NYCOMPS, New York Consortium on Membrane Protein Structure]] |
| - | [[Category: Zhou, M | + | [[Category: Zhou, M]] |
[[Category: Channel]] | [[Category: Channel]] | ||
[[Category: Membrane protein]] | [[Category: Membrane protein]] | ||
[[Category: New york consortium on membrane protein structure]] | [[Category: New york consortium on membrane protein structure]] | ||
[[Category: Nycomp]] | [[Category: Nycomp]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
[[Category: Structural genomic]] | [[Category: Structural genomic]] | ||
[[Category: Transport protein]] | [[Category: Transport protein]] | ||
[[Category: Urea transport]] | [[Category: Urea transport]] | ||
Revision as of 08:30, 18 December 2014
F80A mutant of the Urea Transporter from Desulfovibrio Vulgaris
| |||||||||||
Categories: Desulfovibrio vulgaris | Levin, E J | NYCOMPS, New York Consortium on Membrane Protein Structure | Zhou, M | Channel | Membrane protein | New york consortium on membrane protein structure | Nycomp | PSI, Protein structure initiative | Structural genomic | Transport protein | Urea transport

