This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3mnv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
{{STRUCTURE_3mnv| PDB=3mnv | SCENE= }}
+
==Crystal structure of the non-neutralizing HIV antibody 13H11 Fab fragment==
-
===Crystal structure of the non-neutralizing HIV antibody 13H11 Fab fragment===
+
<StructureSection load='3mnv' size='340' side='right' caption='[[3mnv]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
{{ABSTRACT_PUBMED_21076400}}
+
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3mnv]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MNV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MNV FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3mnw|3mnw]], [[3mnz|3mnz]], [[3mo1|3mo1]], [[3moa|3moa]], [[3mob|3mob]], [[3mod|3mod]]</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mnv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mnv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3mnv RCSB], [http://www.ebi.ac.uk/pdbsum/3mnv PDBsum]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The monoclonal antibody 13H11 shares part of its epitope in the HIV-1 gp41 membrane-proximal external region (MPER) with the rare, broadly neutralizing human antibody 2F5. Although 13H11 partially cross-blocked 2F5 binding, 13H11 is non-neutralizing and does not block 2F5 neutralization. We show that unlike 2F5, 13H11 binds to a well-defined helical MPER structure that is consistent with the structure of gp41 in a post-fusion six-helix bundle conformation.
-
==About this Structure==
+
Crystal structure of a non-neutralizing antibody to the HIV-1 gp41 membrane-proximal external region.,Nicely NI, Dennison SM, Spicer L, Scearce RM, Kelsoe G, Ueda Y, Chen H, Liao HX, Alam SM, Haynes BF Nat Struct Mol Biol. 2010 Dec;17(12):1492-4. Epub 2010 Nov 14. PMID:21076400<ref>PMID:21076400</ref>
-
[[3mnv]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MNV OCA].
+
-
==Reference==
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<ref group="xtra">PMID:021076400</ref><references group="xtra"/><references/>
+
</div>
 +
 
 +
==See Also==
 +
*[[Monoclonal Antibody|Monoclonal Antibody]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Alam, S M.]]
+
[[Category: Alam, S M]]
-
[[Category: Dennison, S M.]]
+
[[Category: Dennison, S M]]
-
[[Category: Haynes, B F.]]
+
[[Category: Haynes, B F]]
-
[[Category: Kelsoe, G.]]
+
[[Category: Kelsoe, G]]
-
[[Category: Liao, H X.]]
+
[[Category: Liao, H X]]
-
[[Category: Nicely, N I.]]
+
[[Category: Nicely, N I]]
-
[[Category: 13h11]]
+
-
[[Category: 2f5]]
+
-
[[Category: 4e10]]
+
[[Category: Fab antibody]]
[[Category: Fab antibody]]
[[Category: Gp41]]
[[Category: Gp41]]

Revision as of 14:51, 18 December 2014

Crystal structure of the non-neutralizing HIV antibody 13H11 Fab fragment

3mnv, resolution 2.40Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools