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3qu1

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{{STRUCTURE_3qu1| PDB=3qu1 | SCENE= }}
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==Peptide deformylase from Vibrio cholerae==
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===Peptide deformylase from Vibrio cholerae===
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<StructureSection load='3qu1' size='340' side='right' caption='[[3qu1]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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== Structural highlights ==
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==Function==
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<table><tr><td colspan='2'>[[3qu1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QU1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3QU1 FirstGlance]. <br>
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[[http://www.uniprot.org/uniprot/DEF2_VIBCH DEF2_VIBCH]] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (By similarity).
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">def, def2, VC_A0150 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 Vibrio cholerae])</td></tr>
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==About this Structure==
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptide_deformylase Peptide deformylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.88 3.5.1.88] </span></td></tr>
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[[3qu1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QU1 OCA].
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qu1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qu1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3qu1 RCSB], [http://www.ebi.ac.uk/pdbsum/3qu1 PDBsum]</span></td></tr>
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</table>
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__TOC__
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</StructureSection>
[[Category: Peptide deformylase]]
[[Category: Peptide deformylase]]
[[Category: Vibrio cholerae]]
[[Category: Vibrio cholerae]]
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[[Category: Anderson, W F.]]
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[[Category: Anderson, W F]]
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[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
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[[Category: Structural genomic]]
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[[Category: Joachimiak, A.]]
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[[Category: Joachimiak, A]]
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[[Category: Mulligan, R.]]
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[[Category: Mulligan, R]]
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[[Category: Osipiuk, J.]]
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[[Category: Osipiuk, J]]
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[[Category: Papazisi, L.]]
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[[Category: Papazisi, L]]
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[[Category: Center for structural genomics of infectious disease]]
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[[Category: Csgid]]
[[Category: Csgid]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Metal binding]]
[[Category: Metal binding]]
[[Category: Metal binding protein]]
[[Category: Metal binding protein]]
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[[Category: Peptide deformylase]]
 
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[[Category: Structural genomic]]
 

Revision as of 10:50, 19 December 2014

Peptide deformylase from Vibrio cholerae

3qu1, resolution 1.80Å

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