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1vkp
From Proteopedia
(Difference between revisions)
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| - | [[Image:1vkp.gif|left|200px]] | + | [[Image:1vkp.gif|left|200px]] |
| - | + | ||
| - | '''X-RAY STRUCTURE OF GENE PRODUCT FROM ARABIDOPSIS THALIANA AT5G08170, AGMATINE IMINOHYDROLASE''' | + | {{Structure |
| + | |PDB= 1vkp |SIZE=350|CAPTION= <scene name='initialview01'>1vkp</scene>, resolution 1.53Å | ||
| + | |SITE= <scene name='pdbsite=AC1:Mg+Binding+Site+For+Residue+B+801'>AC1</scene>, <scene name='pdbsite=AC2:Mg+Binding+Site+For+Residue+A+802'>AC2</scene>, <scene name='pdbsite=AC3:Edo+Binding+Site+For+Residue+A+901'>AC3</scene>, <scene name='pdbsite=AC4:Edo+Binding+Site+For+Residue+A+902'>AC4</scene>, <scene name='pdbsite=AC5:Edo+Binding+Site+For+Residue+A+903'>AC5</scene>, <scene name='pdbsite=AC6:Edo+Binding+Site+For+Residue+B+904'>AC6</scene>, <scene name='pdbsite=AC7:Edo+Binding+Site+For+Residue+B+905'>AC7</scene>, <scene name='pdbsite=AC8:Edo+Binding+Site+For+Residue+A+906'>AC8</scene>, <scene name='pdbsite=AC9:Edo+Binding+Site+For+Residue+A+907'>AC9</scene>, <scene name='pdbsite=BC1:Edo+Binding+Site+For+Residue+A+908'>BC1</scene>, <scene name='pdbsite=BC2:Edo+Binding+Site+For+Residue+B+909'>BC2</scene>, <scene name='pdbsite=BC3:Edo+Binding+Site+For+Residue+A+910'>BC3</scene>, <scene name='pdbsite=BC4:Edo+Binding+Site+For+Residue+B+911'>BC4</scene>, <scene name='pdbsite=BC5:Edo+Binding+Site+For+Residue+B+912'>BC5</scene>, <scene name='pdbsite=BC6:Edo+Binding+Site+For+Residue+B+913'>BC6</scene> and <scene name='pdbsite=BC7:Mpo+Binding+Site+For+Residue+A+1000'>BC7</scene> | ||
| + | |LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene> and <scene name='pdbligand=MPO:3[N-MORPHOLINO]PROPANE SULFONIC ACID'>MPO</scene> | ||
| + | |ACTIVITY= [http://en.wikipedia.org/wiki/Agmatine_deiminase Agmatine deiminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.3.12 3.5.3.12] | ||
| + | |GENE= At5g08170 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana]) | ||
| + | }} | ||
| + | |||
| + | '''X-RAY STRUCTURE OF GENE PRODUCT FROM ARABIDOPSIS THALIANA AT5G08170, AGMATINE IMINOHYDROLASE''' | ||
| + | |||
==About this Structure== | ==About this Structure== | ||
| - | 1VKP is a [ | + | 1VKP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VKP OCA]. |
[[Category: Agmatine deiminase]] | [[Category: Agmatine deiminase]] | ||
[[Category: Arabidopsis thaliana]] | [[Category: Arabidopsis thaliana]] | ||
| Line 21: | Line 30: | ||
[[Category: aih]] | [[Category: aih]] | ||
[[Category: at5g08170]] | [[Category: at5g08170]] | ||
| - | [[Category: center for eukaryotic structural | + | [[Category: center for eukaryotic structural genomic]] |
[[Category: cesg]] | [[Category: cesg]] | ||
[[Category: n-carbamoylputrescine]] | [[Category: n-carbamoylputrescine]] | ||
| Line 28: | Line 37: | ||
[[Category: psi]] | [[Category: psi]] | ||
[[Category: putrescine]] | [[Category: putrescine]] | ||
| - | [[Category: structural | + | [[Category: structural genomic]] |
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 14:46:55 2008'' |
Revision as of 12:46, 20 March 2008
| |||||||
| , resolution 1.53Å | |||||||
|---|---|---|---|---|---|---|---|
| Sites: | , , , , , , , , , , , , , , and | ||||||
| Ligands: | , and | ||||||
| Gene: | At5g08170 (Arabidopsis thaliana) | ||||||
| Activity: | Agmatine deiminase, with EC number 3.5.3.12 | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
X-RAY STRUCTURE OF GENE PRODUCT FROM ARABIDOPSIS THALIANA AT5G08170, AGMATINE IMINOHYDROLASE
About this Structure
1VKP is a Single protein structure of sequence from Arabidopsis thaliana. Full crystallographic information is available from OCA.
Page seeded by OCA on Thu Mar 20 14:46:55 2008
Categories: Agmatine deiminase | Arabidopsis thaliana | Single protein | Allard, S T.M. | Bingman, C A. | CESG, Center for Eukaryotic Structural Genomics. | Jr., G N.Phillips. | Smith, D W. | Wesenberg, G E. | EDO | MG | MPO | Agmatine iminohydrolase | Aih | At5g08170 | Center for eukaryotic structural genomic | Cesg | N-carbamoylputrescine | Polyamine biosynthesis | Protein structure initiative | Psi | Putrescine | Structural genomic
