This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2dzx
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2dzx]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DZX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DZX FirstGlance]. <br> | <table><tr><td colspan='2'>[[2dzx]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DZX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DZX FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1geq|1geq]], [[2dzp|2dzp]], [[2dzs|2dzs]], [[2dzt|2dzt]], [[2dzu|2dzu]], [[2dzv|2dzv]], [[2dzw|2dzw]]</td></tr> | + | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1geq|1geq]], [[2dzp|2dzp]], [[2dzs|2dzs]], [[2dzt|2dzt]], [[2dzu|2dzu]], [[2dzv|2dzv]], [[2dzw|2dzw]]</td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">trpA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2261 Pyrococcus furiosus])</td></tr> | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">trpA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2261 Pyrococcus furiosus])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Tryptophan_synthase Tryptophan synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.20 4.2.1.20] </span></td></tr> | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Tryptophan_synthase Tryptophan synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.20 4.2.1.20] </span></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dzx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dzx OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2dzx RCSB], [http://www.ebi.ac.uk/pdbsum/2dzx PDBsum], [http://www.topsan.org/Proteins/RSGI/2dzx TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dzx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dzx OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2dzx RCSB], [http://www.ebi.ac.uk/pdbsum/2dzx PDBsum], [http://www.topsan.org/Proteins/RSGI/2dzx TOPSAN]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/TRPA_PYRFU TRPA_PYRFU]] The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 35: | Line 37: | ||
[[Category: Pyrococcus furiosus]] | [[Category: Pyrococcus furiosus]] | ||
[[Category: Tryptophan synthase]] | [[Category: Tryptophan synthase]] | ||
| - | [[Category: Ogasahara, K | + | [[Category: Ogasahara, K]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Yamagata, Y | + | [[Category: Yamagata, Y]] |
| - | [[Category: Yutani, K | + | [[Category: Yutani, K]] |
[[Category: Calorimetry]] | [[Category: Calorimetry]] | ||
[[Category: Hyperthermophile]] | [[Category: Hyperthermophile]] | ||
| Line 44: | Line 46: | ||
[[Category: National project on protein structural and functional analyse]] | [[Category: National project on protein structural and functional analyse]] | ||
[[Category: Nppsfa]] | [[Category: Nppsfa]] | ||
| - | [[Category: Pyrococcus furiosus]] | ||
| - | [[Category: Riken structural genomics/proteomics initiative]] | ||
[[Category: Rsgi]] | [[Category: Rsgi]] | ||
[[Category: Stability]] | [[Category: Stability]] | ||
| - | [[Category: Structural genomic]] | ||
[[Category: Tryptophan synthase alpha-subunit]] | [[Category: Tryptophan synthase alpha-subunit]] | ||
[[Category: X-ray analysis]] | [[Category: X-ray analysis]] | ||
Revision as of 06:49, 24 December 2014
Structure of mutant tryptophan synthase alpha-subunit (E131-132A) from a hyperthermophile, Pyrococcus furiosus
| |||||||||||
Categories: Pyrococcus furiosus | Tryptophan synthase | Ogasahara, K | Structural genomic | Yamagata, Y | Yutani, K | Calorimetry | Hyperthermophile | Lyase | National project on protein structural and functional analyse | Nppsfa | Rsgi | Stability | Tryptophan synthase alpha-subunit | X-ray analysis
