This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4dks

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:4dks.jpg|left|200px]]
+
==A spindle-shaped virus protein (chymotrypsin treated)==
-
 
+
<StructureSection load='4dks' size='340' side='right' caption='[[4dks]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
<!--
+
== Structural highlights ==
-
The line below this paragraph, containing "STRUCTURE_4dks", creates the "Structure Box" on the page.
+
<table><tr><td colspan='2'>[[4dks]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_virus_1 Sulfolobus virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DKS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DKS FirstGlance]. <br>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3vcf|3vcf]]</td></tr>
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">d335 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=244589 Sulfolobus virus 1])</td></tr>
-
or leave the SCENE parameter empty for the default display.
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dks FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dks OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dks RCSB], [http://www.ebi.ac.uk/pdbsum/4dks PDBsum]</span></td></tr>
-
-->
+
</table>
-
{{STRUCTURE_4dks| PDB=4dks | SCENE= }}
+
== Function ==
-
 
+
[[http://www.uniprot.org/uniprot/INTG_SSV1 INTG_SSV1]] This protein may encode a site-specific integrase, which is necessary for integration of the phage by site-specific recombination into a tRNA gene of the host chromosome. Essential for virus infection.
-
===A spindle-shaped virus protein (chymotrypsin treated)===
+
__TOC__
-
 
+
</StructureSection>
-
 
+
-
==About this Structure==
+
-
[[4dks]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_virus_1 Sulfolobus virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DKS OCA].
+
[[Category: Sulfolobus virus 1]]
[[Category: Sulfolobus virus 1]]
-
[[Category: Huang, L.]]
+
[[Category: Huang, L]]
-
[[Category: Liang, W.]]
+
[[Category: Liang, W]]
-
[[Category: Liu, Z J.]]
+
[[Category: Liu, Z J]]
-
[[Category: Ouyang, S.]]
+
[[Category: Ouyang, S]]
[[Category: Catalytic domain]]
[[Category: Catalytic domain]]
[[Category: Integrase]]
[[Category: Integrase]]

Revision as of 01:47, 25 December 2014

A spindle-shaped virus protein (chymotrypsin treated)

4dks, resolution 2.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools