This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2jdm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2jdm]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JDM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JDM FirstGlance]. <br>
<table><tr><td colspan='2'>[[2jdm]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JDM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JDM FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=MFU:ALPHA-L-METHYL-FUCOSE'>MFU</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=MFU:ALPHA-L-METHYL-FUCOSE'>MFU</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1gzt|1gzt]], [[1our|1our]], [[1ous|1ous]], [[1oux|1oux]], [[1ovp|1ovp]], [[1ovs|1ovs]], [[1oxc|1oxc]], [[1uzv|1uzv]], [[1w43|1w43]], [[1w8f|1w8f]], [[1w8h|1w8h]], [[2boj|2boj]], [[2bp6|2bp6]], [[2jdh|2jdh]], [[2jdk|2jdk]], [[2jdn|2jdn]], [[2jdp|2jdp]]</td></tr>
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1gzt|1gzt]], [[1our|1our]], [[1ous|1ous]], [[1oux|1oux]], [[1ovp|1ovp]], [[1ovs|1ovs]], [[1oxc|1oxc]], [[1uzv|1uzv]], [[1w43|1w43]], [[1w8f|1w8f]], [[1w8h|1w8h]], [[2boj|2boj]], [[2bp6|2bp6]], [[2jdh|2jdh]], [[2jdk|2jdk]], [[2jdn|2jdn]], [[2jdp|2jdp]]</td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jdm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jdm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2jdm RCSB], [http://www.ebi.ac.uk/pdbsum/2jdm PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jdm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jdm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2jdm RCSB], [http://www.ebi.ac.uk/pdbsum/2jdm PDBsum]</span></td></tr>
-
<table>
+
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 30: Line 30:
</StructureSection>
</StructureSection>
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Adam, J.]]
+
[[Category: Adam, J]]
-
[[Category: Imberty, A.]]
+
[[Category: Imberty, A]]
-
[[Category: Mitchell, E P.]]
+
[[Category: Mitchell, E P]]
-
[[Category: Pokorna, M.]]
+
[[Category: Pokorna, M]]
-
[[Category: Sabin, C.]]
+
[[Category: Sabin, C]]
-
[[Category: Wimmerova, M.]]
+
[[Category: Wimmerova, M]]
[[Category: Cystic fibrosis]]
[[Category: Cystic fibrosis]]
[[Category: Ectin]]
[[Category: Ectin]]
[[Category: Glycomimetic]]
[[Category: Glycomimetic]]
[[Category: Lectin]]
[[Category: Lectin]]

Revision as of 15:52, 19 January 2015

MUTANT (S22A) OF PSEUDOMONAS AERUGINOSA LECTIN II (PA-IIL) COMPLEXED WITH METHYL-A-L-FUCOPYRANOSIDE

2jdm, resolution 1.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools