1vk5

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|PDB= 1vk5 |SIZE=350|CAPTION= <scene name='initialview01'>1vk5</scene>, resolution 1.604&Aring;
|PDB= 1vk5 |SIZE=350|CAPTION= <scene name='initialview01'>1vk5</scene>, resolution 1.604&Aring;
|SITE= <scene name='pdbsite=AC1:So4+Binding+Site+For+Residue+A+300'>AC1</scene>, <scene name='pdbsite=AC2:So4+Binding+Site+For+Residue+A+301'>AC2</scene>, <scene name='pdbsite=AC3:So4+Binding+Site+For+Residue+A+302'>AC3</scene>, <scene name='pdbsite=AC4:Cps+Binding+Site+For+Residue+A+200'>AC4</scene>, <scene name='pdbsite=AC5:Edo+Binding+Site+For+Residue+A+401'>AC5</scene>, <scene name='pdbsite=AC6:Edo+Binding+Site+For+Residue+A+402'>AC6</scene>, <scene name='pdbsite=AC7:Edo+Binding+Site+For+Residue+A+403'>AC7</scene> and <scene name='pdbsite=AC8:Edo+Binding+Site+For+Residue+A+404'>AC8</scene>
|SITE= <scene name='pdbsite=AC1:So4+Binding+Site+For+Residue+A+300'>AC1</scene>, <scene name='pdbsite=AC2:So4+Binding+Site+For+Residue+A+301'>AC2</scene>, <scene name='pdbsite=AC3:So4+Binding+Site+For+Residue+A+302'>AC3</scene>, <scene name='pdbsite=AC4:Cps+Binding+Site+For+Residue+A+200'>AC4</scene>, <scene name='pdbsite=AC5:Edo+Binding+Site+For+Residue+A+401'>AC5</scene>, <scene name='pdbsite=AC6:Edo+Binding+Site+For+Residue+A+402'>AC6</scene>, <scene name='pdbsite=AC7:Edo+Binding+Site+For+Residue+A+403'>AC7</scene> and <scene name='pdbsite=AC8:Edo+Binding+Site+For+Residue+A+404'>AC8</scene>
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|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=CPS:3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE'>CPS</scene> and <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>
+
|LIGAND= <scene name='pdbligand=CPS:3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE'>CPS</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
|ACTIVITY=
|ACTIVITY=
|GENE= At3g22680 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana])
|GENE= At3g22680 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana])
 +
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam09187 DUF1950]</span>
 +
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vk5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vk5 OCA], [http://www.ebi.ac.uk/pdbsum/1vk5 PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=1vk5 RCSB]</span>
}}
}}
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[[Category: Smith, D W.]]
[[Category: Smith, D W.]]
[[Category: Wesenberg, G E.]]
[[Category: Wesenberg, G E.]]
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[[Category: CPS]]
 
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[[Category: EDO]]
 
-
[[Category: SO4]]
 
[[Category: center for eukaryotic structural genomic]]
[[Category: center for eukaryotic structural genomic]]
[[Category: cesg]]
[[Category: cesg]]
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[[Category: unknown function]]
[[Category: unknown function]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 14:46:42 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:09:52 2008''

Revision as of 04:09, 26 March 2008

Image:1vk5.gif


PDB ID 1vk5

Drag the structure with the mouse to rotate
, resolution 1.604Å
Sites: , , , , , , and
Ligands: , ,
Gene: At3g22680 (Arabidopsis thaliana)
Domains: DUF1950
Resources: FirstGlance, OCA, PDBsum, JenaLib, RCSB
Coordinates: save as pdb, mmCIF, xml



X-ray Structure of Gene Product from Arabidopsis Thaliana At3g22680


Overview

The gene product of At3g22680 from Arabidopsis thaliana codes for a protein of unknown function. The crystal structure of the At3g22680 gene product was determined by multiple-wavelength anomalous diffraction and refined to an R factor of 16.0% (Rfree = 18.4%) at 1.60 A resolution. The refined structure shows one monomer in the asymmetric unit, with one molecule of the non-denaturing detergent CHAPS {3-[(3-cholamidopropyl)dimethylammonio]-1-propane sulfonate} tightly bound. Protein At3g22680 shows no structural homology to any other known proteins and represents a new fold in protein conformation space.

About this Structure

1VK5 is a Single protein structure of sequence from Arabidopsis thaliana. Full crystallographic information is available from OCA.

Reference

Structure at 1.6 A resolution of the protein from gene locus At3g22680 from Arabidopsis thaliana., Allard ST, Bingman CA, Johnson KA, Wesenberg GE, Bitto E, Jeon WB, Phillips GN Jr, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Jul 1;61(Pt, 7):647-50. Epub 2005 Jun 30. PMID:16511118

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