4utg

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'''Unreleased structure'''
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==Burkholderia pseudomallei heptokinase WcbL,AMPPNP (ATP analogue) complex.==
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<StructureSection load='4utg' size='340' side='right' caption='[[4utg]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4utg]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UTG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4UTG FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ut4|4ut4]]</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/D-glycero-beta-D-manno-heptose-7-phosphate_kinase D-glycero-beta-D-manno-heptose-7-phosphate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.167 2.7.1.167] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4utg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4utg OCA], [http://pdbe.org/4utg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4utg RCSB], [http://www.ebi.ac.uk/pdbsum/4utg PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Gram-negative bacteria utilize heptoses as part of their repertoire of extracellular polysaccharide virulence determinants. Disruption of heptose biosynthesis offers an attractive target for novel antimicrobials. A critical step in the synthesis of heptoses is their 1-O phosphorylation, mediated by kinases such as HldE or WcbL. Here, we present the structure of WcbL from Burkholderia pseudomallei. We report that WcbL operates through a sequential ordered Bi-Bi mechanism, loading the heptose first and then ATP. We show that dimeric WcbL binds ATP anti-cooperatively in the absence of heptose, and cooperatively in its presence. Modeling of WcbL suggests that heptose binding causes an elegant switch in the hydrogen-bonding network, facilitating the binding of a second ATP molecule. Finally, we screened a library of drug-like fragments, identifying hits that potently inhibit WcbL. Our results provide a novel mechanism for control of substrate binding and emphasize WcbL as an attractive anti-microbial target for Gram-negative bacteria.
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The entry 4utg is ON HOLD until Paper Publication
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Unraveling the B. pseudomallei Heptokinase WcbL: From Structure to Drug Discovery.,Vivoli M, Isupov MN, Nicholas R, Hill A, Scott AE, Kosma P, Prior JL, Harmer NJ Chem Biol. 2015 Dec 17;22(12):1622-32. doi: 10.1016/j.chembiol.2015.10.015. PMID:26687481<ref>PMID:26687481</ref>
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Authors: Vivoli, M., Isupov, M.N., Nicholas, R., Hill, A., Scott, A., Kosma, P., Prior, J., Harmer, N.J.
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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Description: Burkholderia pseudomallei heptokinase WcbL,AMPPNP (ATP analogue) complex.
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<div class="pdbe-citations 4utg" style="background-color:#fffaf0;"></div>
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[[Category: Unreleased Structures]]
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== References ==
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[[Category: Prior, J]]
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<references/>
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[[Category: Vivoli, M]]
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__TOC__
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</StructureSection>
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[[Category: D-glycero-beta-D-manno-heptose-7-phosphate kinase]]
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[[Category: Harmer, N J]]
[[Category: Hill, A]]
[[Category: Hill, A]]
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[[Category: Isupov, M N]]
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[[Category: Kosma, P]]
[[Category: Nicholas, R]]
[[Category: Nicholas, R]]
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[[Category: Isupov, M.N]]
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[[Category: Prior, J]]
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[[Category: Kosma, P]]
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[[Category: Scott, A]]
[[Category: Scott, A]]
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[[Category: Harmer, N.J]]
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[[Category: Vivoli, M]]
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[[Category: Capsular polysaccharide]]
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[[Category: Drug discovery]]
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[[Category: Heptopyranose]]
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[[Category: Transferase]]

Revision as of 20:09, 13 January 2016

Burkholderia pseudomallei heptokinase WcbL,AMPPNP (ATP analogue) complex.

4utg, resolution 1.93Å

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