This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3h14
From Proteopedia
(Difference between revisions)
| Line 2: | Line 2: | ||
<StructureSection load='3h14' size='340' side='right' caption='[[3h14]], [[Resolution|resolution]] 1.90Å' scene=''> | <StructureSection load='3h14' size='340' side='right' caption='[[3h14]], [[Resolution|resolution]] 1.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3h14]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3h14]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ruepo Ruepo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H14 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3H14 FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | ||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SPO2589, YP_167802.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=246200 | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SPO2589, YP_167802.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=246200 RUEPO])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3h14 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h14 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3h14 RCSB], [http://www.ebi.ac.uk/pdbsum/3h14 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3h14 TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3h14 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h14 OCA], [http://pdbe.org/3h14 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3h14 RCSB], [http://www.ebi.ac.uk/pdbsum/3h14 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3h14 TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 16: | Line 16: | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h14 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Ruepo]] |
[[Category: Atwell, S]] | [[Category: Atwell, S]] | ||
[[Category: Bain, K]] | [[Category: Bain, K]] | ||
Revision as of 17:46, 8 February 2016
Crystal structure of a putative aminotransferase from Silicibacter pomeroyi
| |||||||||||
Categories: Ruepo | Atwell, S | Bain, K | Burley, S K | Miller, S | Structural genomic | Rutter, M | Sampathkumar, P | Sauder, J M | Tarun, G | Wasserman, S | Aminotransferase | NYSGXRC, New York SGX Research Center for Structural Genomics | PSI, Protein structure initiative | Pyridoxal phosphate | Silicibacter pomeroyi | Spo2589 | Transferase | Yp 167802 1

