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1spb

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(New page: 200px<br /><applet load="1spb" size="450" color="white" frame="true" align="right" spinBox="true" caption="1spb, resolution 2.0&Aring;" /> '''SUBTILISIN BPN' PROSE...)
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[[Image:1spb.gif|left|200px]]<br /><applet load="1spb" size="450" color="white" frame="true" align="right" spinBox="true"
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==SUBTILISIN BPN' PROSEGMENT (77 RESIDUES) COMPLEXED WITH A MUTANT SUBTILISIN BPN' (266 RESIDUES). CRYSTAL PH 4.6. CRYSTALLIZATION TEMPERATURE 20 C DIFFRACTION TEMPERATURE-160 C==
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caption="1spb, resolution 2.0&Aring;" />
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<StructureSection load='1spb' size='340' side='right' caption='[[1spb]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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'''SUBTILISIN BPN' PROSEGMENT (77 RESIDUES) COMPLEXED WITH A MUTANT SUBTILISIN BPN' (266 RESIDUES). CRYSTAL PH 4.6. CRYSTALLIZATION TEMPERATURE 20 C DIFFRACTION TEMPERATURE-160 C'''<br />
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1spb]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_amyloliquifaciens"_(sic)_fukumoto_1943 "bacillus amyloliquifaciens" (sic) fukumoto 1943]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SPB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1SPB FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Subtilisin Subtilisin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.62 3.4.21.62] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1spb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1spb OCA], [http://pdbe.org/1spb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1spb RCSB], [http://www.ebi.ac.uk/pdbsum/1spb PDBsum]</span></td></tr>
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</table>
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== Function ==
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[[http://www.uniprot.org/uniprot/SUBT_BACAM SUBT_BACAM]] Subtilisin is an extracellular alkaline serine protease, it catalyzes the hydrolysis of proteins and peptide amides. Has a high substrate specificity to fibrin.<ref>PMID:12524032</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sp/1spb_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1spb ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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BACKGROUND: The folding of the bacterial protease subtilisin BPN' (SBT) is dependent on its 77-residue prosegment, which is then autocatalytically removed to give the mature enzyme. Mature subtilisin represents a class of proteins that lacks an efficient folding pathway. Refolding of mature SBT is extremely slow unless catalyzed by the independently expressed prosegment, leading to a bimolecular complex. RESULTS: We report the crystal structure at 2.0 A resolution of the prosegment-SBT complex and consider its implications for prosubtilisin BPN' maturation and folding catalysis. The prosegment forms a compact domain that binds SBT through an extensive interface involving the enzyme's two parallel surface helices (residues 104-116 and 133-144), supplying negatively charged caps to the N termini of these helices. The prosegment C terminus binds in the enzyme active site in a product-like manner, with Tyr77 in the P1 binding pocket. CONCLUSIONS: The structure of the complex supports a unimolecular mechanism for prosubtilisin cleavage, involving a 25 A rearrangement of the SBT N terminus in a late folding step. A mechanism of folding catalysis in which the two helices and their connecting beta strand form a prosegment-stabilized folding nucleus is proposed. While this putative nucleus is stabilized by prosegment binding, the N-terminal and C-terminal subdomains of SBT could fold by propagation.
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==Overview==
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The prosegment-subtilisin BPN' complex: crystal structure of a specific 'foldase'.,Gallagher T, Gilliland G, Wang L, Bryan P Structure. 1995 Sep 15;3(9):907-14. PMID:8535784<ref>PMID:8535784</ref>
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BACKGROUND: The folding of the bacterial protease subtilisin BPN' (SBT) is, dependent on its 77-residue prosegment, which is then autocatalytically, removed to give the mature enzyme. Mature subtilisin represents a class of, proteins that lacks an efficient folding pathway. Refolding of mature SBT, is extremely slow unless catalyzed by the independently expressed, prosegment, leading to a bimolecular complex. RESULTS: We report the, crystal structure at 2.0 A resolution of the prosegment-SBT complex and, consider its implications for prosubtilisin BPN' maturation and folding, catalysis. The prosegment forms a compact domain that binds SBT through an, extensive interface involving the enzyme's two parallel surface helices, (residues 104-116 and 133-144), supplying negatively charged caps to the N, termini of these helices. The prosegment C terminus binds in the enzyme, active site in a product-like manner, with Tyr77 in the P1 binding pocket., CONCLUSIONS: The structure of the complex supports a unimolecular, mechanism for prosubtilisin cleavage, involving a 25 A rearrangement of, the SBT N terminus in a late folding step. A mechanism of folding, catalysis in which the two helices and their connecting beta strand form a, prosegment-stabilized folding nucleus is proposed. While this putative, nucleus is stabilized by prosegment binding, the N-terminal and C-terminal, subdomains of SBT could fold by propagation.
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==About this Structure==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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1SPB is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_amyloliquefaciens Bacillus amyloliquefaciens] with NA as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Subtilisin Subtilisin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.62 3.4.21.62] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1SPB OCA].
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</div>
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<div class="pdbe-citations 1spb" style="background-color:#fffaf0;"></div>
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==Reference==
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==See Also==
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The prosegment-subtilisin BPN' complex: crystal structure of a specific 'foldase'., Gallagher T, Gilliland G, Wang L, Bryan P, Structure. 1995 Sep 15;3(9):907-14. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=8535784 8535784]
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*[[Subtilisin|Subtilisin]]
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[[Category: Bacillus amyloliquefaciens]]
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== References ==
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[[Category: Single protein]]
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<references/>
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__TOC__
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</StructureSection>
[[Category: Subtilisin]]
[[Category: Subtilisin]]
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[[Category: Bryan, P.N.]]
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[[Category: Bryan, P N]]
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[[Category: Gallagher, D.T.]]
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[[Category: Gallagher, D T]]
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[[Category: Gilliland, G.L.]]
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[[Category: Gilliland, G L]]
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[[Category: Wang, L.]]
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[[Category: Wang, L]]
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[[Category: NA]]
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[[Category: Activation domain]]
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[[Category: activation domain]]
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[[Category: Foldase]]
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[[Category: foldase]]
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[[Category: Folding catalyst]]
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[[Category: folding catalyst]]
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[[Category: Propeptide]]
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[[Category: propeptide]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 02:32:37 2007''
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Current revision

SUBTILISIN BPN' PROSEGMENT (77 RESIDUES) COMPLEXED WITH A MUTANT SUBTILISIN BPN' (266 RESIDUES). CRYSTAL PH 4.6. CRYSTALLIZATION TEMPERATURE 20 C DIFFRACTION TEMPERATURE-160 C

1spb, resolution 2.00Å

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