This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3f7y
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==KcsA Potassium channel in the partially open state with 17 A opening at T112== | ==KcsA Potassium channel in the partially open state with 17 A opening at T112== | ||
<StructureSection load='3f7y' size='340' side='right' caption='[[3f7y]], [[Resolution|resolution]] 3.40Å' scene=''> | <StructureSection load='3f7y' size='340' side='right' caption='[[3f7y]], [[Resolution|resolution]] 3.40Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3f7y]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3f7y]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"actinomyces_lividans"_krasil'nikov_et_al._1965 "actinomyces lividans" krasil'nikov et al. 1965] and [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F7Y OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3F7Y FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3f5w|3f5w]], [[3f7v|3f7v]], [[3fb5|3fb5]], [[3fb6|3fb6]], [[3fb7|3fb7]], [[3fb8|3fb8]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3f5w|3f5w]], [[3f7v|3f7v]], [[3fb5|3fb5]], [[3fb6|3fb6]], [[3fb7|3fb7]], [[3fb8|3fb8]]</td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">kcsA, skc1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1916 | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">kcsA, skc1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1916 "Actinomyces lividans" Krasil'nikov et al. 1965])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3f7y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f7y OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3f7y RCSB], [http://www.ebi.ac.uk/pdbsum/3f7y PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3f7y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f7y OCA], [http://pdbe.org/3f7y PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3f7y RCSB], [http://www.ebi.ac.uk/pdbsum/3f7y PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3f7y ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| Line 18: | Line 19: | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3f7y ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Antibody|Antibody]] | ||
*[[Potassium Channel|Potassium Channel]] | *[[Potassium Channel|Potassium Channel]] | ||
| + | *[[3D structures of antibody|3D structures of antibody]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Actinomyces lividans krasil'nikov et al. 1965]] | ||
[[Category: Mus musculus]] | [[Category: Mus musculus]] | ||
| - | [[Category: Streptomyces lividans]] | ||
[[Category: Cortes, D M]] | [[Category: Cortes, D M]] | ||
[[Category: Cuello, L G]] | [[Category: Cuello, L G]] | ||
Revision as of 17:18, 4 August 2016
KcsA Potassium channel in the partially open state with 17 A opening at T112
| |||||||||||
Categories: Actinomyces lividans krasil'nikov et al. 1965 | Mus musculus | Cortes, D M | Cuello, L G | Jogini, V | Perozo, E | Cell membrane | Inactivation | Ion transport | Ionic channel | Kcsa | Membrane | Membrane protein-metal transport complex | Open | Potassium channel | Transmembrane | Transport | Voltage-gated channel
