This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3llv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: {{Seed}} 200px <!-- The line below this paragraph, containing "STRUCTURE_3llv", creates the "Structure Box" on the page. You may change the PDB parameter (which se...)
Current revision (19:23, 5 August 2016) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3llv.jpg|left|200px]]
 
-
<!--
+
==The Crystal Structure of the NAD(P)-binding domain of an Exopolyphosphatase-related protein from Archaeoglobus fulgidus to 1.7A==
-
The line below this paragraph, containing "STRUCTURE_3llv", creates the "Structure Box" on the page.
+
<StructureSection load='3llv' size='340' side='right' caption='[[3llv]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3llv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arcfu Arcfu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LLV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LLV FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
-->
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3llv| PDB=3llv | SCENE= }}
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AF_2029 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224325 ARCFU])</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3llv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3llv OCA], [http://pdbe.org/3llv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3llv RCSB], [http://www.ebi.ac.uk/pdbsum/3llv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3llv ProSAT]</span></td></tr>
-
===The Crystal Structure of the NAD(P)-binding domain of an Exopolyphosphatase-related protein from Archaeoglobus fulgidus to 1.7A===
+
</table>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
3LLV is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LLV OCA].
+
<jmolCheckbox>
-
[[Category: Archaeoglobus fulgidus]]
+
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ll/3llv_consurf.spt"</scriptWhenChecked>
-
[[Category: Chang, C.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Clancy, S.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Hendricks, R.]]
+
</jmolCheckbox>
-
[[Category: Joachimiak, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3llv ConSurf].
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<div style="clear:both"></div>
-
[[Category: Stein, A J.]]
+
__TOC__
-
[[Category: Weger, A.]]
+
</StructureSection>
 +
[[Category: Arcfu]]
 +
[[Category: Chang, C]]
 +
[[Category: Clancy, S]]
 +
[[Category: Hendricks, R]]
 +
[[Category: Joachimiak, A]]
 +
[[Category: Structural genomic]]
 +
[[Category: Stein, A J]]
 +
[[Category: Weger, A]]
[[Category: Exopolyphosphatase-related]]
[[Category: Exopolyphosphatase-related]]
[[Category: Mcsg]]
[[Category: Mcsg]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
[[Category: Rossmann]]
[[Category: Rossmann]]
-
[[Category: Structural genomic]]
 
- 
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 10 18:03:26 2010''
 

Current revision

The Crystal Structure of the NAD(P)-binding domain of an Exopolyphosphatase-related protein from Archaeoglobus fulgidus to 1.7A

3llv, resolution 1.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3llv"
Personal tools