This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3kfw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:27, 11 August 2016) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3kfw.jpg|left|200px]]
 
-
<!--
+
==Uncharacterized protein Rv0674 from Mycobacterium tuberculosis==
-
The line below this paragraph, containing "STRUCTURE_3kfw", creates the "Structure Box" on the page.
+
<StructureSection load='3kfw' size='340' side='right' caption='[[3kfw]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3kfw]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_tuberculosis"_(zopf_1883)_klein_1884 "bacillus tuberculosis" (zopf 1883) klein 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KFW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KFW FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
-->
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MT0703, Rv0674 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 "Bacillus tuberculosis" (Zopf 1883) Klein 1884])</td></tr>
-
{{STRUCTURE_3kfw| PDB=3kfw | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kfw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kfw OCA], [http://pdbe.org/3kfw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3kfw RCSB], [http://www.ebi.ac.uk/pdbsum/3kfw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3kfw ProSAT]</span></td></tr>
-
 
+
</table>
-
===Uncharacterized protein Rv0674 from Mycobacterium tuberculosis===
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
3KFW is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KFW OCA].
+
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kf/3kfw_consurf.spt"</scriptWhenChecked>
-
[[Category: Mycobacterium tuberculosis]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Almo, S C.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Burley, S K.]]
+
</jmolCheckbox>
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kfw ConSurf].
-
[[Category: Ramagopal, U A.]]
+
<div style="clear:both"></div>
-
[[Category: Toro, R.]]
+
__TOC__
-
[[Category: New york sgx research center for structural genomic]]
+
</StructureSection>
-
[[Category: Nysgxrc]]
+
[[Category: Almo, S C]]
-
[[Category: Protein structure initiative]]
+
[[Category: Burley, S K]]
-
[[Category: Psi-2]]
+
[[Category: Structural genomic]]
[[Category: Structural genomic]]
-
 
+
[[Category: Ramagopal, U A]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 2 10:25:58 2009''
+
[[Category: Toro, R]]
 +
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
 +
[[Category: PSI, Protein structure initiative]]
 +
[[Category: Unknown function]]

Current revision

Uncharacterized protein Rv0674 from Mycobacterium tuberculosis

3kfw, resolution 2.50Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools