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3ivd

From Proteopedia

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{{Seed}}
 
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[[Image:3ivd.jpg|left|200px]]
 
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==Putative 5'-Nucleotidase (c4898) from Escherichia Coli in complex with Uridine==
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The line below this paragraph, containing "STRUCTURE_3ivd", creates the "Structure Box" on the page.
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<StructureSection load='3ivd' size='340' side='right' caption='[[3ivd]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3ivd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_o6 Escherichia coli o6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IVD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IVD FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=URI:URIDINE'>URI</scene></td></tr>
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-->
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_3ivd| PDB=3ivd | SCENE= }}
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ive|3ive]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">c4898 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=217992 Escherichia coli O6])</td></tr>
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===Putative 5'-Nucleotidase (c4898) from Escherichia Coli in complex with Uridine===
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ivd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ivd OCA], [http://pdbe.org/3ivd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ivd RCSB], [http://www.ebi.ac.uk/pdbsum/3ivd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ivd ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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==About this Structure==
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[[Image:Consurf_key_small.gif|200px|right]]
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3IVD is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli_o6 Escherichia coli o6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IVD OCA].
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iv/3ivd_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ivd ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
[[Category: Escherichia coli o6]]
[[Category: Escherichia coli o6]]
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[[Category: Almo, S C.]]
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[[Category: Almo, S C]]
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[[Category: Burley, S K.]]
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[[Category: Burley, S K]]
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[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
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[[Category: Structural genomic]]
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[[Category: Ramagopal, U A.]]
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[[Category: Ramagopal, U A]]
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[[Category: Toro, R.]]
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[[Category: Toro, R]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
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[[Category: New york sgx research center for structural genomic]]
 
[[Category: Nucleotidase]]
[[Category: Nucleotidase]]
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[[Category: Nysgxrc]]
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[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
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[[Category: Protein structure initiative]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Psi-2]]
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[[Category: Structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 30 09:31:50 2009''
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Current revision

Putative 5'-Nucleotidase (c4898) from Escherichia Coli in complex with Uridine

3ivd, resolution 1.90Å

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