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3ivd
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3ivd is ON HOLD Authors: Ramagopal, U.A., Toro, R., Burley, S. K, Almo, S. C., New York Structural GenomiX Research Consortium (NYSGXRC) Descriptio...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Putative 5'-Nucleotidase (c4898) from Escherichia Coli in complex with Uridine== | |
| - | + | <StructureSection load='3ivd' size='340' side='right' caption='[[3ivd]], [[Resolution|resolution]] 1.90Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3ivd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_o6 Escherichia coli o6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IVD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IVD FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=URI:URIDINE'>URI</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | '' | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ive|3ive]]</td></tr> |
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">c4898 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=217992 Escherichia coli O6])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ivd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ivd OCA], [http://pdbe.org/3ivd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ivd RCSB], [http://www.ebi.ac.uk/pdbsum/3ivd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ivd ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iv/3ivd_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ivd ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Escherichia coli o6]] | ||
| + | [[Category: Almo, S C]] | ||
| + | [[Category: Burley, S K]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Ramagopal, U A]] | ||
| + | [[Category: Toro, R]] | ||
| + | [[Category: Hydrolase]] | ||
| + | [[Category: Nucleotidase]] | ||
| + | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
Current revision
Putative 5'-Nucleotidase (c4898) from Escherichia Coli in complex with Uridine
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