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3ojc
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3ojc is ON HOLD Authors: Anderson, S.M., Wawrzak, Z., Kudritska, M., Kwon, K., Anderson, W.F., Savchenko, A., Center for Structural Genomics of Infe...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of a putative Asp/Glu Racemase from Yersinia pestis== | |
| - | + | <StructureSection load='3ojc' size='340' side='right' caption='[[3ojc]], [[Resolution|resolution]] 1.75Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3ojc]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Yersinia_pestis_co92 Yersinia pestis co92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OJC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3OJC FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEZ:HEXANE-1,6-DIOL'>HEZ</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">racX, YPO2758, YP_2405 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=214092 Yersinia pestis CO92])</td></tr> | |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ojc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ojc OCA], [http://pdbe.org/3ojc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ojc RCSB], [http://www.ebi.ac.uk/pdbsum/3ojc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ojc ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oj/3ojc_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ojc ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Yersinia pestis co92]] | ||
| + | [[Category: Anderson, S M]] | ||
| + | [[Category: Anderson, W F]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Kudritska, M]] | ||
| + | [[Category: Kwon, K]] | ||
| + | [[Category: Savchenko, A]] | ||
| + | [[Category: Wawrzak, Z]] | ||
| + | [[Category: Alpha beta]] | ||
| + | [[Category: Asp/glu/hydantoin racemase family]] | ||
| + | [[Category: Csgid]] | ||
| + | [[Category: Isomerase]] | ||
| + | [[Category: Rossmann fold]] | ||
Current revision
Crystal structure of a putative Asp/Glu Racemase from Yersinia pestis
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