This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5kxd
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Wisteria floribunda lectin in complex with GalNAc(beta1-4)GlcNAc (LacdiNAc) at pH 6.5== | |
| - | + | <StructureSection load='5kxd' size='340' side='right' caption='[[5kxd]], [[Resolution|resolution]] 1.95Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[5kxd]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Wisteria_floribunda Wisteria floribunda]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KXD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KXD FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=6Y2:~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{S})-5-ACETAMIDO-2-(HYDROXYMETHYL)-6-(4-NITROPHENOXY)-4-OXIDANYL-OXAN-3-YL]OXY-6-(HYDROXYMETHYL)-4,5-BIS(OXIDANYL)OXAN-3-YL]ETHANAMIDE'>6Y2</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr> | |
| - | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5kxd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kxd OCA], [http://pdbe.org/5kxd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5kxd RCSB], [http://www.ebi.ac.uk/pdbsum/5kxd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5kxd ProSAT]</span></td></tr> |
| - | [[Category: Evans, S | + | </table> |
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Wisteria floribunda]] | ||
| + | [[Category: Evans, S V]] | ||
[[Category: Haji-Ghassemi, O]] | [[Category: Haji-Ghassemi, O]] | ||
| + | [[Category: Carbohydrate-binding protein]] | ||
| + | [[Category: Lectin]] | ||
| + | [[Category: Sugar binding protein]] | ||
Revision as of 15:35, 14 September 2016
Wisteria floribunda lectin in complex with GalNAc(beta1-4)GlcNAc (LacdiNAc) at pH 6.5
| |||||||||||
