Isoaspartyl dipeptidase

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== Structural highlights ==
== Structural highlights ==
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The active site of aspartyl dipeptidase contains the substrate and a binuclear metal center which activates the nucleophilic water molecule<ref>PMID:15882050</ref>.
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The <scene name='75/751803/Cv/2'>active site</scene> of aspartyl dipeptidase contains the substrate and a <scene name='75/751803/Cv/3'>binuclear metal center which activates the nucleophilic water molecule</scene><ref>PMID:15882050</ref>.

Revision as of 10:04, 9 March 2017

E. coli isoaspartyl dipeptidase complex with aspartylhistidine and Zn+2 ions (PDB code 1ybq)

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3D structures of dehalogenase

Updated on 09-March-2017

1po9, 1pok, 1onw – EcIadA – Escherichia coli
2aqo, 2aqv – EcIadA (mutant)
1ybq – EcIadA (mutant) + beta-aspartylhistidine
1poj – EcIadA + inhibitor
1onx – EcIadA + aspartate

References

  1. ↑ Michalska K, Brzezinski K, Jaskolski M. Crystal structure of isoaspartyl aminopeptidase in complex with L-aspartate. J Biol Chem. 2005 Aug 5;280(31):28484-91. Epub 2005 Jun 9. PMID:15946951 doi:10.1074/jbc.M504501200
  2. ↑ Marti-Arbona R, Fresquet V, Thoden JB, Davis ML, Holden HM, Raushel FM. Mechanism of the reaction catalyzed by isoaspartyl dipeptidase from Escherichia coli. Biochemistry. 2005 May 17;44(19):7115-24. PMID:15882050 doi:10.1021/bi050008r

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky

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