Chitinase

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Line 29: Line 29:
**[[3n11]] – BcChi – ''Bacillus cereus''<br />
**[[3n11]] – BcChi – ''Bacillus cereus''<br />
**[[3iwr]], [[2dkv]] – Chi residues 33-340 – Japanese rice<br />
**[[3iwr]], [[2dkv]] – Chi residues 33-340 – Japanese rice<br />
-
**[[1edq]], [[1ctn]], [[4axn]] - SmChi – ''Serratia marcescens''<br />
 
-
**[[1x6l]], [[1rd6]] – SmChi (mutant)<br />
 
**[[3g6l]] - BoChi residues 21-426 – ''Bionectria ochroleuca''<br />
**[[3g6l]] - BoChi residues 21-426 – ''Bionectria ochroleuca''<br />
**[[3oa5]], [[4dws]] – Chi – ''Yersinia entomophaga''<br />
**[[3oa5]], [[4dws]] – Chi – ''Yersinia entomophaga''<br />
-
**[[3w4r]] – cbChi – corn borer<br />
 
-
**[[3wkz]] – cbChi (mutant)<br />
 
**[[4mpi]] – HbChi chitin-binding domain – ''Hevea brasiliensis''<br />
**[[4mpi]] – HbChi chitin-binding domain – ''Hevea brasiliensis''<br />
**[[4mst]] – HbChi catalytic domain <br />
**[[4mst]] – HbChi catalytic domain <br />
 +
**[[4wjx]], [[4wka]] – hChi catalytic domain - human<br />
 +
**[[4tx7]] – Chi – yard-long bean<br />
*''Chitinase I binary complex''
*''Chitinase I binary complex''
Line 47: Line 45:
**[[3n12]] – BcChi + Zn<br />
**[[3n12]] – BcChi + Zn<br />
**[[3n1a]] - BcChi (mutant) + inhibitor<br />
**[[3n1a]] - BcChi (mutant) + inhibitor<br />
-
**[[1x6n]] - SmChi (mutant) + inhibitor<br />
 
-
**[[1ffq]] - SmChi + inhibitor<br />
 
-
**[[1nh6]], [[1k9t]], [[1ffr]], [[1eib]], [[1ehn]] - SmChi (mutant) + polysaccharide<br />
 
-
**[[2wk2]], [[2wly]], [[2wlz]], [[2wm0]] – SmChi residues 2-520 + inhibitor <br />
 
**[[3g6m]] - BoChi residues 21-426 + caffeine<br />
**[[3g6m]] - BoChi residues 21-426 + caffeine<br />
-
**[[1waw]], [[1wb0]] – hChi catalytic domain + polypeptide – human<br />
+
**[[1waw]], [[1wb0]], [[4wk9]], [[4wkf]], [[4wkh]] – hChi catalytic domain + polypeptide – human<br />
**[[1hkk]], [[1hkm]], [[3rm4]], [[3rm8]], [[3rm9]], [[3rme]] – hChi catalytic domain + inhibitor<br />
**[[1hkk]], [[1hkm]], [[3rm4]], [[3rm8]], [[3rm9]], [[3rme]] – hChi catalytic domain + inhibitor<br />
**[[1ll4]] - CiChi residues 36-427 + inhibitor<br />
**[[1ll4]] - CiChi residues 36-427 + inhibitor<br />
Line 108: Line 102:
*Chitinase A
*Chitinase A
-
**[[3wh1]], [[3wij]] – BcChiC + GlcNAC – ''Bryum coronatum''<br />
+
**[[3wh1]], [[3wij]] – BcChiA + GlcNAC – ''Bryum coronatum''<br />
-
**[[4ij4]] – BcChiC (mutant) + GlcNAC <br />
+
**[[4ij4]] – BcChiA (mutant) + GlcNAC <br />
-
**[[4mnj]] – spChi – sago palm<br />
+
**[[4mnj]], [[4r5e]] – spChiA – sago palm<br />
-
**[[4mnk]] – spChi + GlcNAC<br />
+
**[[4mnk]] – spChiA + GlcNAC<br />
-
**[[4mnl]], [[4mnm]] – spChi (mutant) + GlcNAC<br />
+
**[[4mnl]], [[4mnm]] – spChiA (mutant) + GlcNAC<br />
 +
**[[5dez]] – ApChiA + NAG – ''Autographa polyhedrosis''<br />
 +
**[[5df0]] – ApChiA + NAG + chitotriothiazoline<br />
 +
**[[5bum]] – ChiA LYSM domain – field horsetail<br />
 +
**[[1edq]], [[1ctn]] - SmChiA – ''Serratia marcescens''<br />
 +
**[[1x6l]], [[1rd6]] – SmChiA (mutant)<br />
 +
**[[1x6n]] - SmChi (mutant) + inhibitor<br />
 +
**[[1ffq]], [[2wk2]], [[2wly]], [[2wlz]], [[[2wm0]] - SmChi + inhibitor<br />
 +
**[[1nh6]], [[1k9t]], [[1ffr]], [[1eib]], [[1ehn]] - SmChi (mutant) + polysaccharide<br />
 +
**[[4pxv]] – PrChiA LYSM domain – ''Pteris ryukuensis''<br />
 +
**[[4rl3]] – PrChiA catalytic domain <br />
 +
 
 +
*Chitinase B
 +
 
 +
**[[4z2g]], [[4z2h]], [[4z2i]], [[4z2j]], [[4z2k]], [[4z2l]] – SmChiB + inhibitor<br />
*Chitinase C
*Chitinase C
Line 119: Line 127:
**[[4dwx]] - RyChiC<br />
**[[4dwx]] - RyChiC<br />
**[[4j0l]] – RyChiC + GlcNAC<br />
**[[4j0l]] – RyChiC + GlcNAC<br />
 +
**[[4axn]] – SmChiC<br />
 +
 +
* Chitinase H
 +
 +
**[[3w4r]], [[5gpr]] – cbChiH – corn borer<br />
 +
**[[3wkz]] – cbChiH (mutant)<br />
 +
**[[5gqb]] – cbChiH + chitohepatose<br />
*Other chitinases
*Other chitinases
Line 142: Line 157:
**[[3w6b]] – RaChi catalytic domain – ''Ralstonia''<br />
**[[3w6b]] – RaChi catalytic domain – ''Ralstonia''<br />
**[[3w6e]] – RaChi catalytic domain (mutant) <br />
**[[3w6e]] – RaChi catalytic domain (mutant) <br />
 +
**[[4w5z]] – Chi 60 catalytic domain – ''Vibrio marinus''<br />
 +
**[[5kz6]] – Chi – ''Bacillus anthracis''<br />
 +
**[[5gzt]], [[5gzv]], [[5gzu]] – ChiW – ''Paeniacillus'' <br />
 +
**[[5dhd]] – TkChi CHBD2 domain – ''Thermococcus kodakarensis''<br />
 +
**[[5dhe]] – TkChi CHBD3 domain <br />
 +
**[[5aa7]] – Chi polusaccharide monooxygenase domain – ''Jonesia dentrificans''<br />
 +
**[[4w5u]] – Chi 40 – ''Streptomyces thermoviolaceus''<br />
 +
**[[4txg]] – Chi – ''Chromobacterium violaceum''<br />
*''Other chitinases binary complex''
*''Other chitinases binary complex''

Revision as of 10:18, 2 April 2017

Chitinase A complex with (GlcNac)4 and ethylene glycol (PDB entry 3wh1)

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3D Structures of Chitinase

Updated on 02-April-2017

References

  1. ↑ Lee CG, Da Silva CA, Dela Cruz CS, Ahangari F, Ma B, Kang MJ, He CH, Takyar S, Elias JA. Role of chitin and chitinase/chitinase-like proteins in inflammation, tissue remodeling, and injury. Annu Rev Physiol. 2011;73:479-501. doi: 10.1146/annurev-physiol-012110-142250. PMID:21054166 doi:http://dx.doi.org/10.1146/annurev-physiol-012110-142250
  2. ↑ Ohnuma T, Umemoto N, Nagata T, Shinya S, Numata T, Taira T, Fukamizo T. Crystal structure of a "loopless" GH19 chitinase in complex with chitin tetrasaccharide spanning the catalytic center. Biochim Biophys Acta. 2014 Feb 25;1844(4):793-802. doi:, 10.1016/j.bbapap.2014.02.013. PMID:24582745 doi:http://dx.doi.org/10.1016/j.bbapap.2014.02.013
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