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1gmy
From Proteopedia
(Difference between revisions)
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| - | == | + | |
| + | ==Cathepsin B complexed with dipeptidyl nitrile inhibitor== | ||
<StructureSection load='1gmy' size='340' side='right' caption='[[1gmy]], [[Resolution|resolution]] 1.90Å' scene=''> | <StructureSection load='1gmy' size='340' side='right' caption='[[1gmy]], [[Resolution|resolution]] 1.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1gmy]] is a 3 chain structure | + | <table><tr><td colspan='2'>[[1gmy]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GMY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GMY FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AEM:2-AMINOETHANIMIDIC+ACID'>AEM</scene>, <scene name='pdbligand=APD:3-METHYLPHENYLALANINE'>APD</scene>, <scene name='pdbligand=DFA:DIPHENYLACETIC+ACID'>DFA</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AEM:2-AMINOETHANIMIDIC+ACID'>AEM</scene>, <scene name='pdbligand=APD:3-METHYLPHENYLALANINE'>APD</scene>, <scene name='pdbligand=DFA:DIPHENYLACETIC+ACID'>DFA</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1csb|1csb]], [[1huc|1huc]], [[1pbh|1pbh]], [[2pbh|2pbh]], [[3pbh|3pbh]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1csb|1csb]], [[1huc|1huc]], [[1pbh|1pbh]], [[2pbh|2pbh]], [[3pbh|3pbh]]</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cathepsin_B Cathepsin B], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.22.1 3.4.22.1] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cathepsin_B Cathepsin B], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.22.1 3.4.22.1] </span></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gmy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gmy OCA], [http://pdbe.org/1gmy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1gmy RCSB], [http://www.ebi.ac.uk/pdbsum/1gmy PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gmy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gmy OCA], [http://pdbe.org/1gmy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1gmy RCSB], [http://www.ebi.ac.uk/pdbsum/1gmy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1gmy ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| Line 18: | Line 19: | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gmy ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Cathepsin B]] | [[Category: Cathepsin B]] | ||
| - | [[Category: Human]] | ||
[[Category: Bohacek, R S]] | [[Category: Bohacek, R S]] | ||
[[Category: Capparelli, M P]] | [[Category: Capparelli, M P]] | ||
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[[Category: Doughty, J R]] | [[Category: Doughty, J R]] | ||
[[Category: Du, Z]] | [[Category: Du, Z]] | ||
| - | [[Category: Duzer, J H. | + | [[Category: Duzer, J H.van]] |
[[Category: Fang, Z]] | [[Category: Fang, Z]] | ||
[[Category: Farley, D L]] | [[Category: Farley, D L]] | ||
| Line 54: | Line 54: | ||
[[Category: Knap, A K]] | [[Category: Knap, A K]] | ||
[[Category: Macchia, W]] | [[Category: Macchia, W]] | ||
| - | [[Category: | + | [[Category: McQuire, L W]] |
[[Category: Tommasi, R A]] | [[Category: Tommasi, R A]] | ||
[[Category: Wigg, A M]] | [[Category: Wigg, A M]] | ||
Revision as of 04:40, 21 September 2017
Cathepsin B complexed with dipeptidyl nitrile inhibitor
| |||||||||||
Categories: Cathepsin B | Bohacek, R S | Capparelli, M P | Clark, K L | Coppa, D E | Cowen, S D | Doughty, J R | Du, Z | Duzer, J H.van | Fang, Z | Farley, D L | Fitt, J J | Goldberg, R L | Goldstein, R | Greenspan, P D | Knap, A K | Macchia, W | McQuire, L W | Tommasi, R A | Wigg, A M | Zhou, H | Zhu, L | Cathepsin b | Covalent complex | Hydrolase | Hydrolase-inhibitor complex | Hydrolase/inhibitor | Protease | Thiol protease
