Ribosomal protein S10

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[[Image:RPS10.png|left|200px|thumb|Crystal Structure of Ribosomal protein S10 from [[2zm6]], chain J]]
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<StructureSection load='2mew' size='350' side='right' caption='Structure of ribosomal protein S10 (PDB entry [[2mew]])' scene=''>
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{{STRUCTURE_2zm6| PDB=2zm6 | SIZE=300| SCENE=Ribosomal_protein_S10/Cv/2 |right|CAPTION=Ribosomal protein S10 from [[2zm6]], chain J }}
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'''Ribosomal protein S10''' (RPS10) is one of the 21 proteins which belong to the 30S small subunit of the [http://en.wikipedia.org/wiki/Bacteria bacterial] [[ribosome]] or the 30 proteins which belong to the 40S small subunit of the eukaryotic ribosome. It functions in binding tRNA to the ribosome and operates as a transcriptional elongation factor<ref>PMID:2987961</ref>.
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</StructureSection>
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Ribosomal protein S10 (RPS10) is one of the 22 proteins which belong to the small subunit of the ribosome. It functions in binding tRNA to the ribosome and operates as a transcriptional elongation factor. The images at the left and at the right correspond to one representative RPS10, ''i.e.'' the crystal structure of Ribosomal protein S10 from ''Thermus thermophilus'' ([[2zm6]], chain J).
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{{TOC limit|limit=2}}
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== 3D Structures of Ribosomal protein S10 ==
== 3D Structures of Ribosomal protein S10 ==
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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
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{{#tree:id=OrganizedByTopic|openlevels=0|
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=== S10 + Protein ===
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*RPS10
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[[3imq]], [[3d3b]], [[3d3c]] - EcRPS10 +NUSB - ''Escherichia coli''<br />
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=== S10 in small ribosomal subunit ===
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[[2zm6]], [[1n36]], [[1j5e]], [[3oto]] - TtRPS10 in 30S ribosomal subunit+THX+16S RRNA – ''Thermus thermophilus''<br />
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[[2vqe]], [[2vqf]], [[2uuc]], [[2e5l]], [[2uu9]], [[2uua]], [[2uub]] - TtRPS10 in 30S ribosomal subunit+16S RRNA+RNA fragment<br />
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[[3kc4]] – EcRPS10 in 30S ribosomal subunit <br />
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[[3i1m]], [[3i1o]], [[3df1]], [[3df3]], [[2vho]], [[2vhp]], [[2avy]], [[2aw7]], [[1pnx]], [[3or9]], [[3ora]] - EcRPS10 in 30S ribosomal subunit+16S RRNA<br />
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[[1i94]], [[1fka]] - TtRPS10 in 30S ribosomal subunit+16S RRNA<br />
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[[1p87]], [[1p6g]] - EcRPS10 in 30S ribosomal subunit+16S RRNA – Cryo-EM<br />
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[[3bbn]] - RPS10 in 30S ribosomal subunit+16S RRNA – Cryo-EM – spinach<br />
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=== S10 in small + large ribosomal subunit ===
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[[1ml5]] - EcRPS10 in 30S ribosomal subunit+50S ribosomal subunit+THX+chain release factor 2+P-site tRNA+tRNA Phe+mRNA fragment+23S RRNA+5S RRNA+16S RRNA - EM<br />
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=== S10 in small ribosomal subunit+ chain release factor ===
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[[3mr8]], [[3ms0]] – TtRPS10 in 30S ribosomal subunit+THX+chain release factor 1+P-site tRNA+mRNA+16S RRNA<br />
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[[3d5a]], [[3d5c]] - TtRPS10 in 30S ribosomal subunit+THX+chain release factor 1+P-site tRNA+E-site tRNA+mRNA +16S RRNA<br />
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[[2b64]] - TtRPS10 in 30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA Phe+mRNA +16S RRNA+chain release factor 1<br />
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[[2b9m]] - TtRPS10 in 30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA Phe+mRNA +16S RRNA+chain release factor 2<br />
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[[2x9r]], [[2x9t]], [[2wh1]], [[2wh3]] - TtRPS10 in 30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+mRNA +16S RRNA<br />
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[[3f1e]], [[3f1g]] - TtRPS10 in 30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+E-site tRNA +16S RRNA<br />
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=== S10 in small ribosomal subunit+tRNA+mRNA ===
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[[2hgi]] - TtRPS10 in 30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA fMet<br />
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[[2hgp]] - TtRPS10 in 30S ribosomal subunit+16S RRNA+tRNA Phe+mRNA<br />
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[[2i2p]], [[2i2u]] - EcRPS10 in 30S ribosomal subunit+16S RRNA+tRNA Phe+mRNA<br />
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[[2hgr]] - TtRPS10 in 30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA fMet+mRNA<br />
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[[1yl4]] – TtRPS10 in 30S ribosomal subunit+ tRNA Phe+16S RRNA+THRS mRNA operator<br />
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[[1pns]] - EcRPS10 in 30S ribosomal subunit+ tRNA Phe+16S RRNA+mRNA <br />
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[[1xnq]], [[1xnr]] - TtRPS10 in 30S ribosomal subunit+THX+mRNA+tRNA anticodon+16S RRNA<br />
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=== S10 in small ribosomal subunit+A-site tRNA ===
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[[2uxd]], [[2uxc]] - TtRPS10 in 30S ribosomal subunit+THX+A-site mRNA CGGG+tRNA anticodon+16S RRNA<br />
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[[1n32]], [[1n33]] - TtRPS10 in 30S ribosomal subunit+THX+A-site mRNA fragment+tRNA anticodon+16S RRNA<br />
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[[1n34]] - TtRPS10 in 30S ribosomal subunit+THX+A-site mRNA fragment +16S RRNA<br />
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[[1xmo]], [[1xmq]] - TtRPS10 in 30S ribosomal subunit+THX+A-site mRNA+tRNA anticodon+16S RRNA<br />
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[[2uxb]] - TtRPS10 in 30S ribosomal subunit+THX+A-site mRNA GGGU+tRNA anticodon+16S RRNA<br />
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=== S10 in small ribosomal subunit+P-site tRNA ===
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[[3i8g]] - TtRPS10 in 30S ribosomal subunit+P-site tRNA+mRNA +16S RRNA<br />
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[[3i8h]], [[3i9b]], [[3i9d]] - TtRPS10 in 30S ribosomal subunit+THX+P-site tRNA+mRNA +16S RRNA<br />
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[[1ibk]] - TtRPS10 in 30S ribosomal subunit+THX+P-site mRNA fragment +16S RRNA<br />
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[[2wwl]] - EcRPS10 in 30S ribosomal subunit+Poly-Ala chain+P-site tRNA+mRNA +16S RRNA - ''Escherichia coli''<br />
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[[3i1q]] - EcRPS10 in 30S ribosomal subunit+P-site tRNA hairpin+mRNA <br />
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[[3i1s]], [[3i1z]], [[3i21]] - EcRPS10 in 30S ribosomal subunit+P-site tRNA hairpin+mRNA +16S RNA<br />
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=== S10 in small ribosomal subunit+A-site tRNA+P-site tRNA ===
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[[1ibl]], [[1ibm]] - TtRPS10 in 30S ribosomal subunit+THX+A-site mRNA fragment+P-site mRNA fragment+tRNA anticodon+16S RRNAv
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=== S10 in small ribosomal subunit+P-site tRNA+E-site tRNA ===
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[[2ow8]] - TtRPS10 in 30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA+mRNA +16S RRNA<br />
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[[2b9o]] - TtRPS10 in 30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA Phe+mRNA +16S RRNA<br />
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[[2qnh]] - TtRPS10 in 30S ribosomal subunit+THX+P-site tRNA+E-site tRNA+mRNA +16S RRNA<br />
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[[2wdg]], [[2wdh]], [[2wdk]], [[2wdm]] - TtRPS10 in 30S ribosomal subunit+THX+P-site tRNA+E-site tRNA+mRNA +16S RRNA+tRNA Phe<br />
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=== S10 in small ribosomal subunit+A-site tRNA+P-site tRNA+E-site tRNA ===
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[[2gy9]], [[2gyb]] - EcRPS10 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA – Cryo-EM<br />
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[[1jgo]], [[1jgp]], [[1jgq]], [[1gix]] - TtRPS10 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+tRNA Phe+mRNA +16S RRNA<br />
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[[3e1a]], [[3e1c]] - EcRPS10 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA<br />
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=== S10 in small ribosomal subunit + antibiotics ===
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[[1i95]] - TtRPS10 in 30S ribosomal subunit+16S RRNA+edeine<br />
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[[1i97]] - TtRPS10 in 30S ribosomal subunit+16S RRNA+tetracycline<br />
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[[1hnw]] - TtRPS10 in 30S ribosomal subunit+16S RRNA+mRNA fragment+tetracycline<br />
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[[1hnx]] - TtRPS10 in 30S ribosomal subunit+16S RRNA+mRNA fragment+pactamycin <br />
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[[1hnz]] - TtRPS10 in 30S ribosomal subunit+16S RRNA+mRNA fragment+hygromycin B<br />
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[[1fjg]] - TtRPS10 in 30S ribosomal subunit+16S RRNA+mRNA fragment+streptomycin<br />
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[[2qbb]], [[2qb9]] - EcRPS10 in 30S ribosomal subunit+16S RRNA+kasugamyin<br />
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[[2hhh]] - TtRPS10 in 30S ribosomal subunit+16S RRNA+kasugamyin<br />
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[[2f4v]] - TtRPS10 in 30S ribosomal subunit+16S RRNA+designed antibiotic<br />
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[[1vs5]], [[1vs7]] - EcRPS10 in 30S ribosomal subunit+16S RRNA+gentamicin<br />
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[[2qan]], [[2qal]] - EcRPS10 in 30S ribosomal subunit+16S RRNA+neomycin<br />
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[[2qou]], [[2qow]] - EcRPS10 in 30S ribosomal subunit+16S RRNA+spectinomycin<br />
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[[2qoy]], [[2qp0]] - EcRPS10 in 30S ribosomal subunit+16S RRNA+spectinomycin+neomycin<br />
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[[2z4k]], [[2z4m]] - EcRPS10 in 30S ribosomal subunit+16S RRNA+paromomycin<br />
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[[2j00]], [[2j02]] - TtRPS10 in 30S ribosomal subunit+16S RRNA+paromomycin+P-site tRNA fMet+E-site tRNA Phe+mRNA<br />
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[[3knj]], [[3knh]] - TtRPS10 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA+viomycin<br />
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[[3knl]], [[3knn]] - TtRPS10 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA+capreomycin<br />
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=== S10 in small ribosomal subunit + ribosome recycling factor ===
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[[2qbd]], [[2qbf]] – EcRPS10 in 30S ribosomal subunit+16S RRNA+ribosome recycling factor<br />
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[[2qbh]], [[2qbj]] - EcRPS10 in 30S ribosomal subunit+16S RRNA+ribosome recycling factor+gentamicin<br />
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[[2v46]], [[2v48]] - TtRPS10 in 30S ribosomal subunit+16S RRNA+ribosome recycling factor+P-site tRNA Phe+mRNA+tRNA fMet<br />
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=== S10 in small ribosomal subunit + elongation factor ===
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[[2wri]], [[2wrk]] - TtRPS10 in 30S ribosomal subunit+THX+P-site tRNA+mRNA +16S RRNA+elongation factor G<br />
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[[2wrn]], [[2wrq]] - TtRPS10 in 30S ribosomal subunit+THX+A-site tRNA+mRNA +16S RRNA+elongation factor TU-4<br />
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[[3fic]] - TtRPS10 in 30S ribosomal subunit+THX+A-site tRNA+P-site tRNA+E-site tRNA+mRNA codon+16S RRNA+elongation factor TU-A<br />
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[[3fih]] - EcRPS10 in 30S ribosomal subunit+A-site tRNA Phe+P-site tRNA+mRNA +16S RRNA+elongation factor TU<br />
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[[3huw]], [[3huy]] - TtRPS10 in 30S ribosomal subunit+THX+tRNA-Met+mRNA +16S RRNA+elongation factor P<br />
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=== S10 in small ribosomal subunit + translation initiation factor ===
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[[1i96]] - TtRPS10 in 30S ribosomal subunit+THX+IF3+16S RRNA<br />
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[[1hr0]] - TtRPS10 in 30S ribosomal subunit+THX+IF+16S RRNA<br />
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=== S10 in small ribosomal subunit + various proteins ===
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**[[2mew]] – RPS10 – ''Thermotoga maritima'' – NMR<br />
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*RPS10 + Protein
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[[3kiq]], [[3kis]], [[3kiu]], [[3kix]] - TtRPS10 in 30S ribosomal subunit+toxin RelE+16S RRNA<br />
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**[[3imq]], [[3d3b]], [[3d3c]] - EcRPS10 +NUSB - ''Escherichia coli''<br />
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[[1voq]], [[1vos]], [[1vov]], [[1vox]], [[1voz]] - EcRPS10 in 30S ribosomal subunit+protein Y+16S RRNA<br />
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**[[5lm7]] - EcRPS10 +NUSB + NUSA + antitermination protein<br />
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[[2xfz]], [[2xg1]] - TtRPS10 in 30S ribosomal subunit+tRNA Phe+mRNA+colicin E3+16S RRNA<br />
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**[[3w1y]] – EcRPS10 + microtubule-associated protein<br />
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**[[3r2c]], [[3r2d]] – RPS10 + NUSB + RNA – ''Aquifex aeolicus''
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}}
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== References ==
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<references/>
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[[Category:Topic Page]]

Current revision

Structure of ribosomal protein S10 (PDB entry 2mew)

Drag the structure with the mouse to rotate

3D Structures of Ribosomal protein S10

Updated on 28-September-2017

References

  1. ↑ Das A, Ghosh B, Barik S, Wolska K. Evidence that ribosomal protein S10 itself is a cellular component necessary for transcription antitermination by phage lambda N protein. Proc Natl Acad Sci U S A. 1985 Jun;82(12):4070-4. PMID:2987961

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky

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