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2dc8
From Proteopedia
(Difference between revisions)
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==X-ray crystal structure analysis of bovine spleen cathepsin B-CA059 complex== | ==X-ray crystal structure analysis of bovine spleen cathepsin B-CA059 complex== | ||
<StructureSection load='2dc8' size='340' side='right' caption='[[2dc8]], [[Resolution|resolution]] 1.94Å' scene=''> | <StructureSection load='2dc8' size='340' side='right' caption='[[2dc8]], [[Resolution|resolution]] 1.94Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2dc8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2dc8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bovin Bovin]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DC8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DC8 FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=59A:N-{[(2S,3S)-3-(ETHOXYCARBONYL)OXIRAN-2-YL]CARBONYL}-L-ISOLEUCINE'>59A</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=59A:N-{[(2S,3S)-3-(ETHOXYCARBONYL)OXIRAN-2-YL]CARBONYL}-L-ISOLEUCINE'>59A</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ito|1ito]], [[1qdq|1qdq]], [[2dc6|2dc6]], [[2dc7|2dc7]], [[2dc9|2dc9]], [[2dca|2dca]], [[2dcb|2dcb]], [[2dcc|2dcc]], [[2dcd|2dcd]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ito|1ito]], [[1qdq|1qdq]], [[2dc6|2dc6]], [[2dc7|2dc7]], [[2dc9|2dc9]], [[2dca|2dca]], [[2dcb|2dcb]], [[2dcc|2dcc]], [[2dcd|2dcd]]</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cathepsin_B Cathepsin B], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.22.1 3.4.22.1] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cathepsin_B Cathepsin B], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.22.1 3.4.22.1] </span></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dc8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dc8 OCA], [http://pdbe.org/2dc8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dc8 RCSB], [http://www.ebi.ac.uk/pdbsum/2dc8 PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dc8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dc8 OCA], [http://pdbe.org/2dc8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dc8 RCSB], [http://www.ebi.ac.uk/pdbsum/2dc8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2dc8 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dc8 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
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| - | ==See Also== | ||
| - | *[[Cathepsin|Cathepsin]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Bovin]] |
[[Category: Cathepsin B]] | [[Category: Cathepsin B]] | ||
[[Category: Watanabe, D]] | [[Category: Watanabe, D]] | ||
Revision as of 11:15, 12 October 2017
X-ray crystal structure analysis of bovine spleen cathepsin B-CA059 complex
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Categories: Bovin | Cathepsin B | Watanabe, D | Ca059 | Cathepsin b | Cysteine protease | Ec 3 4.22 1 | Hydrolase
