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3out
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3out is ON HOLD Authors: Filippova, E.V., Wawrzak, Z., Onopriyenko, O., Kudriska, M., Edwards, A., Savchenko, A., Anderson, F.W., Center for Structu...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of glutamate racemase from Francisella tularensis subsp. tularensis SCHU S4 in complex with D-glutamate.== | |
| - | + | <StructureSection load='3out' size='340' side='right' caption='[[3out]], [[Resolution|resolution]] 1.65Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3out]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"francisella_tularensis_subsp._nearctica"_olsufjev_1970 "francisella tularensis subsp. nearctica" olsufjev 1970]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OUT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3OUT FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DGL:D-GLUTAMIC+ACID'>DGL</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">FTT_1197c, murI ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=119856 "Francisella tularensis subsp. nearctica" Olsufjev 1970])</td></tr> | |
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutamate_racemase Glutamate racemase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.1.3 5.1.1.3] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3out FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3out OCA], [http://pdbe.org/3out PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3out RCSB], [http://www.ebi.ac.uk/pdbsum/3out PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3out ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/Q5NFN6_FRATT Q5NFN6_FRATT]] Provides the (R)-glutamate required for cell wall biosynthesis (By similarity).[HAMAP-Rule:MF_00258][SAAS:SAAS018187_004_003686] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ou/3out_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3out ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Francisella tularensis subsp. nearctica olsufjev 1970]] | ||
| + | [[Category: Glutamate racemase]] | ||
| + | [[Category: Anderson, F W]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Edwards, A]] | ||
| + | [[Category: Filippova, E V]] | ||
| + | [[Category: Kudriska, M]] | ||
| + | [[Category: Onopriyenko, O]] | ||
| + | [[Category: Savchenko, A]] | ||
| + | [[Category: Wawrzak, Z]] | ||
| + | [[Category: Cell envelope]] | ||
| + | [[Category: Csgid]] | ||
| + | [[Category: Francisella tularensis subsp. tularensis schu s4]] | ||
| + | [[Category: Isomerase]] | ||
| + | [[Category: Muri]] | ||
Current revision
Crystal structure of glutamate racemase from Francisella tularensis subsp. tularensis SCHU S4 in complex with D-glutamate.
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Categories: Francisella tularensis subsp. nearctica olsufjev 1970 | Glutamate racemase | Anderson, F W | Structural genomic | Edwards, A | Filippova, E V | Kudriska, M | Onopriyenko, O | Savchenko, A | Wawrzak, Z | Cell envelope | Csgid | Francisella tularensis subsp. tularensis schu s4 | Isomerase | Muri
