This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2bok
From Proteopedia
| Line 4: | Line 4: | ||
|PDB= 2bok |SIZE=350|CAPTION= <scene name='initialview01'>2bok</scene>, resolution 1.64Å | |PDB= 2bok |SIZE=350|CAPTION= <scene name='initialview01'>2bok</scene>, resolution 1.64Å | ||
|SITE= <scene name='pdbsite=AC1:Na+Binding+Site+For+Chain+A'>AC1</scene> | |SITE= <scene name='pdbsite=AC1:Na+Binding+Site+For+Chain+A'>AC1</scene> | ||
| - | |LIGAND= | + | |LIGAND= <scene name='pdbligand=784:[AMINO+(4-{(3AS,4R,8AS,8BR)-1,3-DIOXO-2-+[3-(TRIMETHYLAMMONIO)+PROPYL]DECAHYDROPYRROLO[3,4-A]+PYRROLIZIN-4-YL}PHENYL)+METHYLENE]AMMONIUM'>784</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene> |
| - | |ACTIVITY= [http://en.wikipedia.org/wiki/Coagulation_factor_Xa Coagulation factor Xa], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.6 3.4.21.6] | + | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Coagulation_factor_Xa Coagulation factor Xa], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.6 3.4.21.6] </span> |
|GENE= | |GENE= | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY= | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bok FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bok OCA], [http://www.ebi.ac.uk/pdbsum/2bok PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2bok RCSB]</span> | ||
}} | }} | ||
'''FACTOR XA- CATION''' | '''FACTOR XA- CATION''' | ||
| - | |||
| - | ==Disease== | ||
| - | Known disease associated with this structure: Factor X deficiency OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=227600 227600]] | ||
==About this Structure== | ==About this Structure== | ||
| Line 32: | Line 32: | ||
[[Category: Schlatter, D.]] | [[Category: Schlatter, D.]] | ||
[[Category: Stihle, M.]] | [[Category: Stihle, M.]] | ||
| - | [[Category: 784]] | ||
| - | [[Category: NA]] | ||
[[Category: cation]] | [[Category: cation]] | ||
[[Category: coagulation factor]] | [[Category: coagulation factor]] | ||
| Line 43: | Line 41: | ||
[[Category: serine protease]] | [[Category: serine protease]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:09:31 2008'' |
Revision as of 23:09, 30 March 2008
| |||||||
| , resolution 1.64Å | |||||||
|---|---|---|---|---|---|---|---|
| Sites: | |||||||
| Ligands: | , | ||||||
| Activity: | Coagulation factor Xa, with EC number 3.4.21.6 | ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
FACTOR XA- CATION
About this Structure
2BOK is a Protein complex structure of sequences from Homo sapiens. Full crystallographic information is available from OCA.
Reference
Quantification of cation-pi interactions in protein-ligand complexes: crystal-structure analysis of Factor Xa bound to a quaternary ammonium ion ligand., Scharer K, Morgenthaler M, Paulini R, Obst-Sander U, Banner DW, Schlatter D, Benz J, Stihle M, Diederich F, Angew Chem Int Ed Engl. 2005 Jul 11;44(28):4400-4. PMID:15952226
Page seeded by OCA on Mon Mar 31 02:09:31 2008
Categories: Coagulation factor Xa | Homo sapiens | Protein complex | Banner, D W. | Benz, J. | Diederich, F. | Morgenthaler, M. | Obst-Sander, U. | Paulini, R. | Schaerer, K. | Schlatter, D. | Stihle, M. | Cation | Coagulation factor | Egf-like domain | Hydrolase | Inhibitor | Plasma | Protease | Serine protease
