5mc0
From Proteopedia
(Difference between revisions)
m (Protected "5mc0" [edit=sysop:move=sysop]) |
|||
Line 1: | Line 1: | ||
- | '''Unreleased structure''' | ||
- | + | ==Crystal Structure of delTyr231 mutant of Human Prolidase with Mn ions and GlyPro ligand== | |
- | + | <StructureSection load='5mc0' size='340' side='right' caption='[[5mc0]], [[Resolution|resolution]] 1.56Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[5mc0]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MC0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MC0 FirstGlance]. <br> | |
- | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GLY:GLYCINE'>GLY</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=OH:HYDROXIDE+ION'>OH</scene>, <scene name='pdbligand=PRO:PROLINE'>PRO</scene></td></tr> | |
- | [[Category: | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5m4j|5m4j]], [[5mby|5mby]], [[5mbz|5mbz]], [[5mc1|5mc1]], [[5mc2|5mc2]], [[5mc3|5mc3]], [[5mc4|5mc4]], [[5mc5|5mc5]]</td></tr> |
+ | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Xaa-Pro_dipeptidase Xaa-Pro dipeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.13.9 3.4.13.9] </span></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5mc0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mc0 OCA], [http://pdbe.org/5mc0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mc0 RCSB], [http://www.ebi.ac.uk/pdbsum/5mc0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mc0 ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Disease == | ||
+ | [[http://www.uniprot.org/uniprot/PEPD_HUMAN PEPD_HUMAN]] Defects in PEPD are a cause of prolidase deficiency (PD) [MIM:[http://omim.org/entry/170100 170100]]. Prolidase deficiency is an autosomal recessive disorder associated with iminodipeptiduria. The clinical phenotype includes skin ulcers, mental retardation, recurrent infections, and a characteristic facies. These features, however are incompletely penetrant and highly variable in both age of onset and severity. There is a tight linkage between the polymorphisms of prolidase and the myotonic dystrophy trait.<ref>PMID:2365824</ref> <ref>PMID:8198124</ref> <ref>PMID:8900231</ref> <ref>PMID:12384772</ref> | ||
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/PEPD_HUMAN PEPD_HUMAN]] Splits dipeptides with a prolyl or hydroxyprolyl residue in the C-terminal position. Plays an important role in collagen metabolism because the high level of iminoacids in collagen. | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Xaa-Pro dipeptidase]] | ||
[[Category: Dobbek, H]] | [[Category: Dobbek, H]] | ||
+ | [[Category: Mueller, U]] | ||
+ | [[Category: Weiss, M S]] | ||
[[Category: Wilk, P]] | [[Category: Wilk, P]] | ||
- | [[Category: | + | [[Category: Hydrolase]] |
- | [[Category: | + | [[Category: Hydrolysis]] |
+ | [[Category: Metalloenzyme]] | ||
+ | [[Category: Mutation]] | ||
+ | [[Category: Peptidase]] | ||
+ | [[Category: Pita-bread]] | ||
+ | [[Category: Prolidase]] |
Revision as of 06:06, 20 December 2017
Crystal Structure of delTyr231 mutant of Human Prolidase with Mn ions and GlyPro ligand
|
Categories: Xaa-Pro dipeptidase | Dobbek, H | Mueller, U | Weiss, M S | Wilk, P | Hydrolase | Hydrolysis | Metalloenzyme | Mutation | Peptidase | Pita-bread | Prolidase