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1y9e
From Proteopedia
(Difference between revisions)
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<StructureSection load='1y9e' size='340' side='right' caption='[[1y9e]], [[Resolution|resolution]] 2.80Å' scene=''> | <StructureSection load='1y9e' size='340' side='right' caption='[[1y9e]], [[Resolution|resolution]] 2.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1y9e]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/" | + | <table><tr><td colspan='2'>[[1y9e]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y9E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Y9E FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr> | ||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1tt7|1tt7]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1tt7|1tt7]]</td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yhfP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 " | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yhfP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1y9e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y9e OCA], [http://pdbe.org/1y9e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1y9e RCSB], [http://www.ebi.ac.uk/pdbsum/1y9e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1y9e ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/1y9e TOPSAN]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1y9e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y9e OCA], [http://pdbe.org/1y9e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1y9e RCSB], [http://www.ebi.ac.uk/pdbsum/1y9e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1y9e ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/1y9e TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y9/1y9e_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y9/1y9e_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 22: | Line 22: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Vibrio subtilis ehrenberg 1835]] |
[[Category: Burley, S K]] | [[Category: Burley, S K]] | ||
[[Category: Gorman, J]] | [[Category: Gorman, J]] | ||
Revision as of 18:42, 24 January 2018
Crystal structure of Bacillus subtilis protein yhfP with NAD bound
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Categories: Vibrio subtilis ehrenberg 1835 | Burley, S K | Gorman, J | Min, T | Structural genomic | Shapiro, L | Alcohol dehydrogenase activity | Bacillus subtili | Hypothetical protein yhfp | NYSGXRC, New York SGX Research Center for Structural Genomics | PSI, Protein structure initiative | Unknown function | Zinc-dependent
