This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2qgv
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of hydrogenase-1 operon protein hyaE from Shigella flexneri. Northeast Structural Genomics Consortium Target SfR170== | ==Crystal structure of hydrogenase-1 operon protein hyaE from Shigella flexneri. Northeast Structural Genomics Consortium Target SfR170== | ||
<StructureSection load='2qgv' size='340' side='right' caption='[[2qgv]], [[Resolution|resolution]] 2.70Å' scene=''> | <StructureSection load='2qgv' size='340' side='right' caption='[[2qgv]], [[Resolution|resolution]] 2.70Å' scene=''> | ||
| Line 5: | Line 6: | ||
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hyaE, SF0977, S_1044 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=198214 Shigella flexneri 2a str. 301])</td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hyaE, SF0977, S_1044 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=198214 Shigella flexneri 2a str. 301])</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qgv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qgv OCA], [http://pdbe.org/2qgv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2qgv RCSB], [http://www.ebi.ac.uk/pdbsum/2qgv PDBsum], [http://www.topsan.org/Proteins/NESGC/2qgv TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qgv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qgv OCA], [http://pdbe.org/2qgv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2qgv RCSB], [http://www.ebi.ac.uk/pdbsum/2qgv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2qgv ProSAT], [http://www.topsan.org/Proteins/NESGC/2qgv TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 11: | Line 12: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qg/2qgv_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qg/2qgv_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qgv ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
| Line 28: | Line 29: | ||
[[Category: Hunt, J F]] | [[Category: Hunt, J F]] | ||
[[Category: Liu, J]] | [[Category: Liu, J]] | ||
| - | [[Category: Ma, L | + | [[Category: Ma, L C]] |
[[Category: Montelione, G T]] | [[Category: Montelione, G T]] | ||
[[Category: Structural genomic]] | [[Category: Structural genomic]] | ||
Revision as of 18:59, 24 January 2018
Crystal structure of hydrogenase-1 operon protein hyaE from Shigella flexneri. Northeast Structural Genomics Consortium Target SfR170
| |||||||||||
Categories: Shigella flexneri 2a str. 301 | Acton, T B | Baran, M C | Benach, J | Cunningham, K | Fang, Y | Forouhar, F | Hunt, J F | Liu, J | Ma, L C | Montelione, G T | Structural genomic | Rost, B | Seetharaman, J | Su, M | Tong, L | Wang, D | Xiao, R | Alpha-beta protein | Nesg | PSI, Protein structure initiative | Unknown function
